Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7bgd
Q-score: 0.507
Belinite M, Khusainov I, Soufari H, Marzi S, Romby P, Yusupov M, Hashem Y
Front Mol Biosci (2021) 8 pp. 1022- [ ]
- 30s ribosomal protein s5 (17 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- Mrna (Complex from Staphylococcus aureus subsp. aureus NCTC 8325)
- 30s ribosomal protein s6 (11 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s8 (14 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s17 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s11 (13 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 16s ribosomal rna (503 kDa, RNA from Staphylococcus aureus)
- 30s ribosomal protein s15 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s16 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s18 (9 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal subunit (Complex from Staphylococcus aureus subsp. aureus NCTC 8325)
- Mrna (10 kDa, RNA from Staphylococcus aureus)
- 30s ribosomal protein s2 (29 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- Staphylococcus aureus 30s ribosomal subunit in the presence of spermidine (body only) (Complex)
- 30s ribosomal protein s4 (23 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s12 (15 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s20 (9 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7bge
Q-score: 0.432
Belinite M, Khusainov I, Soufari H, Marzi S, Romby P, Yusupov M, Hashem Y
Front Mol Biosci (2021) 8 pp. 1022- [ ]
- Staphylococcus aureus 30s ribosomal subunit in presence of spermidine (head only) (Complex from Staphylococcus aureus subsp. aureus NCTC 8325)
- 16s ribosomal rna (503 kDa, RNA from Staphylococcus aureus subsp. aureus NCTC 8325)
- 30s ribosomal protein s19 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s13 (13 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s2 (29 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s3 (24 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s7 (17 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s9 (14 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s14 type z (7 kDa, Protein from Staphylococcus aureus (strain NCTC 8325))
- 30s ribosomal protein s10 (11 kDa, Protein from Staphylococcus aureus subsp. aureus NCTC 8325)
Staphylococcus aureus 30S ribosomal subunit in absence of spermidine with fixed helix 44
Belinite M, Khusainov I, Soufari H, Marzi S, Romby P, Yusupov M, Hashem Y
Front Mol Biosci (2021) 8 pp. 738752-738752 [ DOI: doi:10.3389/fmolb.2021.738752 Pubmed: 34869582 ]
Staphylococcus aureus 30S ribosomal subunit in absence of spermidine with reoriented helix 44
Belinite M, Khusainov I, Soufari H, Marzi S, Romby P, Yusupov M, Hashem Y
Front Mol Biosci (2021) 8 pp. 738752-738752 [ DOI: doi:10.3389/fmolb.2021.738752 Pubmed: 34869582 ]
Leishmania Major mitochondrial ribosome
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ane
Q-score: 0.321
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ml100 (146 kDa, Protein from Leishmania major)
- Ms61 (33 kDa, Protein from Leishmania major)
- Ms52 (75 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ms56 (43 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ms65 (30 kDa, Protein from Leishmania major)
- Rhodanese domain-containing protein (30 kDa, Protein from Leishmania major)
- Ms62 (27 kDa, Protein from Leishmania major)
- Ms58 (36 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ms55 (65 kDa, Protein from Leishmania major)
- Ms51 (94 kDa, Protein from Leishmania major)
- Ms34 (29 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (53 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (18 kDa, Protein from Leishmania major)
- Ms73 (11 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Excreted/secreted protein 15 (92 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Us8m (35 kDa, Protein from Leishmania major)
- Ms49 (133 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ms48 (199 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Magnesium ion (24 Da, Ligand)
- Ms53 (72 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Ubiquitin-like domain-containing protein (27 kDa, Protein from Leishmania major)
- Ms47 (131 kDa, Protein from Leishmania major)
- Ms63 (33 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Bl21m (20 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Us14m (19 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ml38 (57 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ms35 (99 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Us15m (50 kDa, Protein from Leishmania major)
- Us3m (10 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Ms57 (45 kDa, Protein from Leishmania major)
- Ms59 (35 kDa, Protein from Leishmania major)
- Ms22 (73 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Leishmania major)
- Us9m (39 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml59/64 (28 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Ms29 (54 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Bs18m (37 kDa, Protein from Leishmania major)
- Us19m (19 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Bl20m (22 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Bs21m (22 kDa, Protein from Leishmania major)
- Ms33 (20 kDa, Protein from Leishmania major)
- Ul4m (49 kDa, Protein from Leishmania major)
- Ms50 (139 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Protein fyv4, mitochondrial (22 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Putative superoxide dismutase (30 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Bs6m (18 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Us11m (40 kDa, Protein from Leishmania major)
- Ms69 (16 kDa, Protein from Leishmania major)
- Ml52 (29 kDa, Protein from Leishmania major)
- Ms66 (44 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ms43 (51 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- 30s ribosomal protein s17-like protein (36 kDa, Protein from Leishmania major)
- Ms60 (35 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Ms37 (24 kDa, Protein from Leishmania major)
- Us10m (92 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ms72 (19 kDa, Protein from Leishmania major)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Akap7_nls domain-containing protein (31 kDa, Protein from Leishmania major)
- Large ribosomal rna (6 MDa, RNA from Leishmania major)
- Bs16m (22 kDa, Protein from Leishmania major)
- Ms26 (49 kDa, Protein from Leishmania major)
- Ms70 (21 kDa, Protein from Leishmania major)
- Ms23 (36 kDa, Protein from Leishmania major)
- Leishmania major mitochondrial riobosome (Complex from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Ms71 (19 kDa, Protein from Leishmania major)
The Large subunit of the Kinetoplastid mitochondrial ribosome
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7aih
Q-score: 0.479
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Ribosomal rna (2 MDa, RNA from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Ml52,ml52 (29 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ul4m (50 kDa, Protein from Leishmania major)
- Bl21m (21 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Ml54/69 (28 kDa, Protein from Leishmania major)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (19 kDa, Protein from Leishmania major)
- Bl20 (22 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Bl19m (16 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Ml38 (58 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
Intermediate assembly of the Large subunit from Leishmania major mitochondrial ribosome
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7am2
Q-score: 0.469
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ribosomal rna (6 MDa, RNA from Leishmania tarentolae)
- Ml71 (49 kDa, Protein from Leishmania tarentolae)
- Ml100 (146 kDa, Protein from Leishmania tarentolae)
- Ul30m (45 kDa, Protein from Leishmania tarentolae)
- Ml59/64 (28 kDa, Protein from Leishmania tarentolae)
- Ml74 (39 kDa, Protein from Leishmania tarentolae)
- Ml75 (39 kDa, Protein from Leishmania tarentolae)
- Rna uridylyltransferase (23 kDa, Protein from Leishmania tarentolae)
- Ml86 (21 kDa, Protein from Leishmania tarentolae)
- L0r8f8 (14 kDa, Protein from Leishmania tarentolae)
- U5 (6 kDa, Protein from Leishmania tarentolae)
- U1 (3 kDa, Protein from Leishmania tarentolae)
- Ml98 (13 kDa, Protein from Leishmania tarentolae)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania tarentolae)
- Ml84 (24 kDa, Protein from Leishmania tarentolae)
- Gtpase der (56 kDa, Protein from Leishmania tarentolae)
- Ua (14 kDa, Protein from Leishmania tarentolae)
- Ml53 (35 kDa, Protein from Leishmania tarentolae)
- Bl21m (21 kDa, Protein from Leishmania tarentolae)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ul4m (50 kDa, Protein from Leishmania tarentolae)
- Pseudouridylate synthase-like protein (47 kDa, Protein from Leishmania tarentolae)
- Ul24m (53 kDa, Protein from Leishmania tarentolae)
- Ml85 (27 kDa, Protein from Leishmania tarentolae)
- U6 (13 kDa, Protein from Leishmania tarentolae)
- Ml76 (38 kDa, Protein from Leishmania tarentolae)
- Ml41 (22 kDa, Protein from Leishmania tarentolae)
- R5 (1 kDa, RNA from Leishmania tarentolae)
- G domain-containing protein (86 kDa, Protein from Leishmania tarentolae)
- G domain-containing protein (51 kDa, Protein from Leishmania tarentolae)
- Bl19m (16 kDa, Protein from Leishmania tarentolae)
- Ml87 (22 kDa, Protein from Leishmania tarentolae)
- Ml68 (65 kDa, Protein from Leishmania tarentolae)
- Ml93 (18 kDa, Protein from Leishmania tarentolae)
- Ml88 (22 kDa, Protein from Leishmania tarentolae)
- R1 (896 Da, RNA from Leishmania tarentolae)
- Ul23m (28 kDa, Protein from Leishmania tarentolae)
- Dead/deah box helicase-like protein (87 kDa, Protein from Leishmania tarentolae)
- Bl35m (18 kDa, Protein from Leishmania tarentolae)
- Ml80 (27 kDa, Protein from Leishmania tarentolae)
- R2 (10 kDa, RNA from Leishmania tarentolae)
- Ml52,ml52 (29 kDa, Protein from Leishmania tarentolae)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania tarentolae)
- Bl32m (9 kDa, Protein from Leishmania tarentolae)
- Ml99 (13 kDa, Protein from Leishmania tarentolae)
- U4 (9 kDa, Protein from Leishmania tarentolae)
- Ml78 (3 kDa, Protein from Leishmania tarentolae)
- Bl28m (27 kDa, Protein from Leishmania tarentolae)
- U8 (4 kDa, Protein from Leishmania tarentolae)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania tarentolae)
- Ml95 (18 kDa, Protein from Leishmania tarentolae)
- Ml81 (37 kDa, Protein from Leishmania tarentolae)
- Ul29m (54 kDa, Protein from Leishmania tarentolae)
- Dnaj-like protein (45 kDa, Protein from Leishmania tarentolae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- U2 (2 kDa, Protein from Leishmania tarentolae)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania tarentolae)
- Ul22m (32 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania tarentolae)
- Ml70 (50 kDa, Protein from Leishmania tarentolae)
- Ml72 (56 kDa, Protein from Leishmania tarentolae)
- U3 (5 kDa, Protein from Leishmania tarentolae)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania tarentolae)
- Ml94 (17 kDa, Protein from Leishmania tarentolae)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania tarentolae)
- Spou_methylase domain-containing protein (63 kDa, Protein from Leishmania tarentolae)
- Bl20m (22 kDa, Protein from Leishmania tarentolae)
- Ml67 (97 kDa, Protein from Leishmania tarentolae)
- Ml78 (33 kDa, Protein from Leishmania tarentolae)
- Acyl carrier protein (16 kDa, Protein from Leishmania tarentolae)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania tarentolae)
- Ml49 (26 kDa, Protein from Leishmania tarentolae)
- Ml89 (21 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania tarentolae)
- Trud domain-containing protein (68 kDa, Protein from Leishmania tarentolae)
- Ml42 (22 kDa, Protein from Leishmania tarentolae)
- Ml63 (18 kDa, Protein from Leishmania tarentolae)
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7aor
Q-score: 0.416
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ms56 (47 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms72 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms68 (27 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms60 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Murf5 (10 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Trafficking protein particle complex subunit (28 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us15m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms52 (81 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms62 (31 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms59 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms48 (206 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us11m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms66 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs16m (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms51 (95 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms37 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms38 (26 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs21m (23 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs6m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-if3 (42 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms61 (32 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Magnesium ion (24 Da, Ligand)
- Ms47 (134 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms53 (76 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms49 (136 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex)
- Rna (478-mer) (2 MDa, RNA from Trypanosoma cruzi (strain CL Brener))
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us19 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms65 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms58 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms29 (57 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs18m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms54 (77 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms70 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Akap7_nls domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms26 (51 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Protein fyv4, mitochondrial (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us9m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms69 (21 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms55 (67 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi)
- Zinc ion (65 Da, Ligand)
- Superoxide dismutase, putative (38 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms23 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms73 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms22 (73 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms57 (46 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Sod_fe_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi (strain CL Brener))
- Ribosome protein s12 (9 kDa, Protein from Trypanosoma cruzi)
- Ms50 (129 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Rhodanese domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms35 (99 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ms33 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us14m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms71 (25 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Uridine 5'-triphosphate (484 Da, Ligand)
- Us10m (94 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us8m (33 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- 30s ribosomal protein s17-like protein (35 kDa, Protein from Trypanosoma cruzi)
- Ms63 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 7kwg
Q-score: 0.397
Belinite M, Khusainov I, Soufari H, Marzi S, Romby P, Yusupov M, Hashem Y
Front Mol Biosci (2021) 8 pp. 738752-738752 [ DOI: doi:10.3389/fmolb.2021.738752 Pubmed: 34869582 ]
- Staphylococcus aureus 30s ribosomal subunit in presence of spermidine (Complex from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s12 (15 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s5 (17 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s14 type z (7 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 16s ribosomal rna (503 kDa, RNA from Staphylococcus aureus subsp. aureus NCTC 8325)
- 30s ribosomal protein s19 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s20 (9 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s11 (13 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s7 (17 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s4 (23 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s15 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- Mrna (10 kDa, RNA from Staphylococcus aureus subsp. aureus NCTC 8325)
- 30s ribosomal protein s6 (11 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s10 (11 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s18 (9 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s8 (14 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s17 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s2 (29 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s16 (10 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s13 (13 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s3 (24 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))
- 30s ribosomal protein s9 (14 kDa, Protein from Staphylococcus aureus (strain NCTC 8325 / PS 47))