Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8bmw
Q-score: 0.37
Cannone G, Kompaniiets D, Graham S, White MF, Spagnolo L
Curr Res Struct Biol (2023) 5 pp. 100098-100098 [ Pubmed: 36843655 DOI: doi:10.1016/j.crstbi.2023.100098 ]
- Crispr-associated protein cas10 (type iii-d) (94 kDa, Protein from Saccharolobus solfataricus)
- Crispr-associated small subunit protein (type iii-d) (15 kDa, Protein from Saccharolobus solfataricus)
- Crispr-associated cas7 paralog (type iii-d) (31 kDa, Protein from Saccharolobus solfataricus)
- Rna (48-mer) (14 kDa, RNA from Saccharolobus solfataricus)
- Crispr-associated cas7 paralog (type iii-d) (22 kDa, Protein from Saccharolobus solfataricus)
- Crispr-associated protein cas5 (type iii-d) (34 kDa, Protein from Saccharolobus solfataricus)
- Ssocsm (Complex from Saccharolobus solfataricus)
- Crispr-associated cas7 paralog (type iii-d) (27 kDa, Protein from Saccharolobus solfataricus)
- Crispr-associated cas7 paralog (type iii-d) (28 kDa, Protein from Saccharolobus solfataricus)
- Crispr-associated cas7 paralog (type iii-d) (30 kDa, Protein from Saccharolobus solfataricus)
TIR-SAVED effector bound to cA3
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7qqk
Q-score: 0.405
Hogrel G, Guild A, Graham S, Rickman H, Gruschow S, Bertrand Q, Spagnolo L, White MF
Nature (2022) 608 pp. 808-812 [ Pubmed: 35948638 DOI: doi:10.1038/s41586-022-05070-9 ]
Mono-ubiquitinated FANCD2 in complex with FANCI
Rennie ML, Lemonidis K, Arkinson C, Chaugule VK, Clarke M, Streetley J, Spagnolo L, Walden H
EMBO Rep (2020) 21 pp. e50133-e50133 [ DOI: doi:10.15252/embr.202050133 Pubmed: 32510829 ]
- Fancd2 mono-ubiquitinated at k561 (Protein from Homo sapiens)
- Fanci (Protein from Homo sapiens)
- Binary complex of mono-ubiquitinated fancd2 and fanci (330 kDa, Complex from Homo sapiens)
Mono-ubiquitinated FANCD2 in complex with mono-ubiquitinated FANCI and dsDNA
Rennie ML, Lemonidis K, Arkinson C, Chaugule VK, Clarke M, Streetley J, Spagnolo L, Walden H
EMBO Rep (2020) 21 pp. e50133-e50133 [ DOI: doi:10.15252/embr.202050133 Pubmed: 32510829 ]
- Ternary complex of mono-ubiquitinated fancd2, mono-ubiquitinated fanci, and 32 base pair dsdna (350 kDa, Complex)
- Double stranded dna, 32 base pairs (DNA from synthetic construct)
- 32 base pair dsdna (Complex from synthetic construct)
- Fancd2 mono-ubiquitinated at k561 (Protein from Homo sapiens)
- Mono-ubiquitinated fancd2, mono-ubiquitinated fanci (Complex from Homo sapiens)
- Fanci mono-ubiquitinated at k523 (Protein from Homo sapiens)
Electron microscopy of the CSM/RNA complex from Sulfolobus solfataricus
Rouillon C, Zhou M, Zhang J, Politis A, Beilsten V, Cannone G, Graham S, Robinson CV, Spagnolo L, White MF
Mol Cell (2013) 52 pp. 124-134 [ Pubmed: 24119402 DOI: doi:10.1016/j.molcel.2013.08.020 ]
Rivera-Calzada A, Maman JD, Maman JP, Spagnolo L, Pearl LH, Llorca O
Structure (2005) 13 pp. 243-255 [ DOI: doi:10.1016/j.str.2004.12.006 Pubmed: 15698568 ]
Spagnolo L, Rivera-Calzada A, Pearl LH, Llorca O
Mol Cell (2006) 22 pp. 511-519 [ Pubmed: 16713581 DOI: doi:10.1016/j.molcel.2006.04.013 ]
- Dna-pkcs (470 kDa, Protein from Homo sapiens)
- Ku70 (70 kDa, Protein from Homo sapiens)
- Macromolecular complex containing dna, dnapkcs, ku70 and ku80 (650 kDa, Sample)
- Ku80 (85 kDa, Protein from Homo sapiens)
- Dna (DNA)
Spagnolo L, Rivera-Calzada A, Pearl LH, Llorca O
Mol Cell (2006) 22 pp. 511-519 [ Pubmed: 16713581 DOI: doi:10.1016/j.molcel.2006.04.013 ]
- Ku80 (80 kDa, Protein from Homo sapiens)
- Dna-bound dnapkcs-ku70-ku80 complex (650 kDa, Sample)
- Dna-pkcs (470 kDa, Protein from Homo sapiens)
- Ku70 (70 kDa, Protein from Homo sapiens)
- Dna (DNA)
Spagnolo L, Rivera-Calzada A, Pearl LH, Llorca O
Mol Cell (2006) 22 pp. 511-519 [ Pubmed: 16713581 DOI: doi:10.1016/j.molcel.2006.04.013 ]
- Dna-pkcs (470 kDa, Protein from Homo sapiens)
- Ku80 (85 kDa, Protein from Homo sapiens)
- Ku70 (70 kDa, Protein from Homo sapiens)
- Dimer containing two dna-bound dnapkcs-ku70-ku80 complexes (1 MDa, Sample)
- Dna (DNA)
Structural model of full-length human Ku70-Ku80 heterodimer and its recognition of DNA and DNA-PKcs.
Rivera-Calzada A, Spagnolo L, Pearl LH, Llorca O
EMBO Rep (2007) 8 pp. 56-62 [ DOI: doi:10.1038/sj.embor.7400847 Pubmed: 17159921 ]
- Ku70-ku80 heterodimer purified from hela cell nuclear extracts (152 kDa, Sample)
- Ku70 (70 kDa, Protein from Homo sapiens)
- Ku80 (82 kDa, Protein from Homo sapiens)