Cryo-EM structure of the Omicron S in complex with 35B5 Fab(1 down-, 1 up- and 1 invisible RBDs)
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 7wlz
Q-score: 0.395
Wang X, Chen X, Tan J, Yue S, Zhou R, Xu Y, Lin Y, Yang Y, Zhou Y, Deng K, Chen Z, Ye L, Zhu Y
Cell Host Microbe (2022) 30 pp. 887- [ Pubmed: 35436443 DOI: doi:10.1016/j.chom.2022.03.035 ]
- Heavy chain of 35b5 fab (25 kDa, Protein from Homo sapiens)
- Complex of sars-cov-2 spike glycoprotein and 35b5 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Light chain of 35b5 fab (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike glycoprotein (Complex from Homo sapiens)
- 35b5 fab (Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of the flagellar LP ring from Salmonella
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7cbl
Q-score: 0.588
Tan J, Zhang X, Wang X, Xu C, Chang S, Wu H, Wang T, Liang H, Gao H, Zhou Y, Zhu Y
Cell (2021) 184 pp. 2665-2679.e19 [ DOI: doi:10.1016/j.cell.2021.03.057 Pubmed: 33882274 ]
- Flagellar hook-basal body (Complex from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
- Octanoic acid (caprylic acid) (144 Da, Ligand)
- Flagellar p-ring protein (38 kDa, Protein from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
- Flagellar l-ring protein (24 kDa, Protein from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Structure of human 1G05 Fab in complex with influenza virus neuraminidase from B/Phuket/3073/2013
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 6v4n
Q-score: 0.594
Madsen A, Dai YN, McMahon M, Schmitz AJ, Turner JS, Tan J, Lei T, Alsoussi WB, Strohmeier S, Amor M, Mohammed BM, Mudd PA, Simon V, Cox RJ, Fremont DH, Krammer F, Ellebedy AH
Immunity (2020) 53 pp. 852- [ Pubmed: 32976769 DOI: doi:10.1016/j.immuni.2020.08.015 ]
- Water (18 Da, Ligand)
- Influenza virus neuraminidase (Complex from Influenza B virus)
- Structure of human 1g05 fab in complex with influenza virus neuraminidase from b/phuket/3073/2013 (400 kDa, Complex)
- Antibody fab light chain (23 kDa, Protein from Homo sapiens)
- Beta-d-mannopyranose (180 Da, Ligand)
- Neuraminidase (50 kDa, Protein from Influenza B virus)
- Calcium ion (40 Da, Ligand)
- Antibody fab heavy chain (26 kDa, Protein from Homo sapiens)
- Human antibody (Complex from Homo sapiens)
Structure of human 2E01 Fab in complex with influenza virus neuraminidase from B/Phuket/3073/2013
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6v4o
Q-score: 0.525
Madsen A, Dai YN, McMahon M, Schmitz AJ, Turner JS, Tan J, Lei T, Alsoussi WB, Strohmeier S, Amor M, Mohammed BM, Mudd PA, Simon V, Cox RJ, Fremont DH, Krammer F, Ellebedy AH
Immunity (2020) 53 pp. 852- [ Pubmed: 32976769 DOI: doi:10.1016/j.immuni.2020.08.015 ]
- Antibody fab light chain (23 kDa, Protein from Homo sapiens)
- Influenza virus neuraminidase (Complex from Influenza B virus)
- Structure of human 2e01 fab in complex with influenza virus neuraminidase from b/phuket/3073/2013 (400 kDa, Complex)
- Beta-d-mannopyranose (180 Da, Ligand)
- Neuraminidase (50 kDa, Protein from Influenza B virus)
- Antibody fab heavy chain (26 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Human antibody (Complex from Homo sapiens)