Resolution: 4.176 Å
EM Method: Single-particle
Fitted PDBs: 7ymd
Q-score: 0.319
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Non-structural maintenance of chromosome element 4 (46 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosome element 3 (34 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of nse1/3/4 (Complex from Saccharomyces cerevisiae S288c)
- Non-structural maintenance of chromosomes element 1 (38 kDa, Protein from Saccharomyces cerevisiae S288C)
4.27 Angstrom resolution cryo-EM structure of human dimeric ATM kinase
Cryo-EM Structure of Human SRCAP Complex
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6igm
Q-score: 0.253
Cell Res (2018) 28 pp. 1121-1123 [ DOI: doi:10.1038/s41422-018-0102-y Pubmed: 30337683 ]
- Unknown subunit (5 kDa, Protein from Homo sapiens)
- Srcap complex (Complex from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Actin-related protein 6 (45 kDa, Protein from Homo sapiens)
- Helicase srcap (343 kDa, Protein from Homo sapiens)
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6jxa
Q-score: 0.204
Tel1 kinase butterfly symmetric dimer
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6jxc
Q-score: 0.288
Structure of Snf2-nucleosome complex at shl2 in ADP BeFx state
Resolution: 4.31 Å
EM Method: Single-particle
Fitted PDBs: 5z3u
Q-score: 0.372
Li M, Xia X, Tian Y, Jia Q, Liu X, Lu Y, Li M, Li X, Chen Z
Nature (2019) 567 pp. 409-413 [ DOI: doi:10.1038/s41586-019-1029-2 Pubmed: 30867599 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Transcription regulatory protein snf2 (85 kDa, Protein from Saccharomyces cerevisiae)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Dna (167-mer) (51 kDa, DNA from synthetic construct)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Histone h2a (13 kDa, Protein from Xenopus laevis)
- Complex of snf2 and nucleosome in adp befx state (300 kDa, Complex from Xenopus laevis)
- Magnesium ion (24 Da, Ligand)
- Beryllium trifluoride ion (66 Da, Ligand)
- Dna (167-mer) (51 kDa, DNA from synthetic construct)
Structure of Snf2-nucleosome complex at shl-2 in ADP BeFx state
Resolution: 4.22 Å
EM Method: Single-particle
Fitted PDBs: 5z3v
Q-score: 0.356
Li M, Xia X, Tian Y, Jia Q, Liu X, Lu Y, Li M, Li X, Chen Z
Nature (2019) 567 pp. 409-413 [ DOI: doi:10.1038/s41586-019-1029-2 Pubmed: 30867599 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Dna (167-mer) (51 kDa, DNA from synthetic construct)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Histone h2a (13 kDa, Protein from Xenopus laevis)
- Complex of snf2 and nucleosome in adp befx state (300 kDa, Complex from Xenopus laevis)
- Beryllium trifluoride ion (66 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Transcription regulatory protein snf2 (85 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna (167-mer) (51 kDa, DNA from synthetic construct)
Structure of Snf2-nucleosome complex in apo state
Resolution: 4.31 Å
EM Method: Single-particle
Fitted PDBs: 5z3l
Q-score: 0.261
Li M, Xia X, Tian Y, Jia Q, Liu X, Lu Y, Li M, Li X, Chen Z
Nature (2019) 567 pp. 409-413 [ DOI: doi:10.1038/s41586-019-1029-2 Pubmed: 30867599 ]
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Complex of snf2 and nucleosome in apo state (300 kDa, Complex from Xenopus laevis)
- Transcription regulatory protein snf2 (85 kDa, Protein from Saccharomyces cerevisiae)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Dna (167-mer) (51 kDa, DNA from synthetic construct)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Histone h2a (13 kDa, Protein from Xenopus laevis)
- Dna (167-mer) (51 kDa, DNA from synthetic construct)
4.9 Angstrom Cryo-EM structure of human mTOR complex 2
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 5zcs
Q-score: 0.164
Chen X, Liu M, Tian Y, Li J, Qi Y, Zhao D, Wu Z, Huang M, Wong CCL, Wang HW, Wang J, Yang H, Xu Y
Cell Res (2018) 28 pp. 518-528 [ Pubmed: 29567957 DOI: doi:10.1038/s41422-018-0029-3 ]
- Target of rapamycin complex 2 subunit mapkap1 (55 kDa, Protein from Homo sapiens)
- Human mtor complex 2 (1 GDa, Complex from Homo sapiens)
- Serine/threonine-protein kinase mtor (289 kDa, Protein from Homo sapiens)
- Rapamycin-insensitive companion of mtor (175 kDa, Protein from Homo sapiens)
- Target of rapamycin complex subunit lst8 (35 kDa, Protein from Homo sapiens)
Cryo-EM Structure of human ATR-ATRIP complex
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 5yz0
Q-score: 0.281
Rao Q, Liu M, Tian Y, Wu Z, Hao Y, Song L, Qin Z, Ding C, Wang HW, Wang J, Xu Y
Cell Res (2018) 28 pp. 143-156 [ DOI: doi:10.1038/cr.2017.158 Pubmed: 29271416 ]
- Serine/threonine-protein kinase atr (301 kDa, Protein from Homo sapiens)
- Atr-atrip complex (700 MDa, Complex from Homo sapiens)
- Atr-interacting protein (85 kDa, Protein from Homo sapiens)