Cryo-EM structure of 5-subunit Smc5/6 arm region
Resolution: 5.97 Å
EM Method: Single-particle
Fitted PDBs: 8i4v
Q-score: 0.108
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Cryo-em structure of 5-subunit smc5/6 arm region (Complex from Saccharomyces cerevisiae)
- E3 sumo-protein ligase mms21 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna repair protein kre29 (7 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (123 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of 5-subunit Smc5/6 head region
Resolution: 6.01 Å
EM Method: Single-particle
Fitted PDBs: 8i4w
Q-score: 0.067
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Non-structural maintenance of chromosome element 5 (64 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna repair protein kre29 (53 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 5-subunit smc5/6 head region (Complex from Saccharomyces cerevisiae S288c)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of 5-subunit Smc5/6
Resolution: 8.5 Å
EM Method: Single-particle
Fitted PDBs: 8i4x
Q-score: 0.019
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Structural maintenance of chromosomes protein 6 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 5-subunit smc5/6 (Complex from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosome element 5 (64 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (123 kDa, Protein from Saccharomyces cerevisiae S288C)
- Nse6 (44 kDa, Protein from Saccharomyces cerevisiae S288C)
- E3 sumo-protein ligase mms21 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of 8-subunit Smc5/6 arm region
Resolution: 6.04 Å
EM Method: Single-particle
Fitted PDBs: 8wjo
Q-score: 0.171
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Dna repair protein kre29 (53 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 8-subunit smc5/6 arm region (98 MDa, Complex from Saccharomyces cerevisiae)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
- E3 sumo-protein ligase mms21 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of 8-subunit Smc5/6 head region
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8hqs
Q-score: 0.247
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Non-structural maintenance of chromosome element 5 (64 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna repair protein kre29 (53 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosome element 3 (34 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosomes element 1 (38 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosome element 4 (46 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 8-subunit smc5/6 head region (Complex from Saccharomyces cerevisiae)
Cryo-EM structure of 8-subunit Smc5/6
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 7yqh
Q-score: 0.19
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Non-structural maintenance of chromosome element 5 (64 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna repair protein kre29 (53 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosome element 3 (34 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 8-subunit smc5/6 (Complex from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosomes element 4 (46 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosomes element 1 (38 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
- E3 sumo-protein ligase mms21 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Structure of nucleosome-bound human BAF complex
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6ltj
Q-score: 0.007
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
Science (2020) 367 pp. 875-881 [ Pubmed: 32001526 DOI: doi:10.1126/science.aaz9761 ]
- Baf (Complex from Homo sapiens)
- Nucleosome (Complex from Xenopus calcaratus)
- Swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily d member 1 (58 kDa, Protein from Homo sapiens)
- Actin-like protein 6a (45 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Homo sapiens)
- Transcription activator brg1 (184 kDa, Protein from Homo sapiens)
- Swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily b member 1 (38 kDa, Protein from Homo sapiens)
- Swi/snf complex subunit smarcc2 (133 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Histone h2a type 1 (13 kDa, Protein from Xenopus laevis)
- Histone h2b (13 kDa, Protein from Xenopus laevis)
- Histone h3.3 (15 kDa, Protein from Xenopus laevis)
- Dna (119-mer) (36 kDa, DNA from Homo sapiens)
- Dna (119-mer) (36 kDa, DNA from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Structure of nucleosome-bound human baf complex (Complex)
- Zinc finger protein ubi-d4 (32 kDa, Protein from Homo sapiens)
- At-rich interactive domain-containing protein 1a (142 kDa, Protein from Homo sapiens)
- Swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily e member 1 (46 kDa, Protein from Homo sapiens)
4.9 Angstrom Cryo-EM structure of human mTOR complex 2
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 5zcs
Q-score: 0.164
Chen X, Liu M, Tian Y, Li J, Qi Y, Zhao D, Wu Z, Huang M, Wong CCL, Wang HW, Wang J, Yang H, Xu Y
Cell Res (2018) 28 pp. 518-528 [ Pubmed: 29567957 DOI: doi:10.1038/s41422-018-0029-3 ]
- Target of rapamycin complex 2 subunit mapkap1 (55 kDa, Protein from Homo sapiens)
- Human mtor complex 2 (1 GDa, Complex from Homo sapiens)
- Serine/threonine-protein kinase mtor (289 kDa, Protein from Homo sapiens)
- Rapamycin-insensitive companion of mtor (175 kDa, Protein from Homo sapiens)
- Target of rapamycin complex subunit lst8 (35 kDa, Protein from Homo sapiens)
Cryo-EM Structure of human ATR-ATRIP complex
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 5yz0
Q-score: 0.281
Rao Q, Liu M, Tian Y, Wu Z, Hao Y, Song L, Qin Z, Ding C, Wang HW, Wang J, Xu Y
Cell Res (2018) 28 pp. 143-156 [ DOI: doi:10.1038/cr.2017.158 Pubmed: 29271416 ]
- Serine/threonine-protein kinase atr (301 kDa, Protein from Homo sapiens)
- Atr-atrip complex (700 MDa, Complex from Homo sapiens)
- Atr-interacting protein (85 kDa, Protein from Homo sapiens)
Cryo-EM structure of Human DNA-PK Holoenzyme
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 5y3r
Q-score: 0.217
Yin X, Liu M, Tian Y, Wang J, Xu Y
Cell Res (2017) 27 pp. 1341-1350 [ DOI: doi:10.1038/cr.2017.110 Pubmed: 28840859 ]
- Prkdc-helix (Complex from Homo sapiens)
- X-ray repair cross-complementing protein 6 (57 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 5 (60 kDa, Protein from Homo sapiens)
- Dna (34-mer) (10 kDa, DNA from Homo sapiens)
- Dna (36-mer) (11 kDa, DNA from Homo sapiens)
- Prkdc-helix (1 kDa, Protein from Homo sapiens)
- Dna-dependent protein kinase catalytic subunit (468 kDa, Protein from Homo sapiens)