Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8zne
Q-score: 0.596
Wakabayashi T, Oide M, Matsui Y, Nakasako M
To Be Published
- Water (18 Da, Ligand)
- Nadp nicotinamide-adenine-dinucleotide phosphate (743 Da, Ligand)
- Hexamer of w89f mutated glutamate dehydrogenase (280 kDa, Complex from Thermococcus profundus)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- Glutamic acid (147 Da, Ligand)
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 8znb
Q-score: 0.6
Wakabayashi T, Oide M, Matsui Y, Nakasako M
To Be Published
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- Water (18 Da, Ligand)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Hexamer of w89f mutated glutamate dehydrogenase (280 kDa, Complex from Thermococcus profundus)
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 8znc
Q-score: 0.625
Wakabayashi T, Oide M, Matsui Y, Nakasako M
To Be Published
- Water (18 Da, Ligand)
- Ammonium ion (18 Da, Ligand)
- Hexamer of w89f mutated glutamate dehydrogenase (280 kDa, Cellular component from Thermococcus profundus)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- 2-oxoglutaric acid (146 Da, Ligand)
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 8znd
Q-score: 0.639
Wakabayashi T, Oide M, Matsui Y, Nakasako M
To Be Published
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- Water (18 Da, Ligand)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Hexamer of w89f mutated glutamate dehydrogenase (280 kDa, Complex from Thermococcus profundus)
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8zng
Q-score: 0.646
Wakabayashi T, Oide M, Matsui Y, Nakasako M
To Be Published
- Water (18 Da, Ligand)
- Hexamer of w89f mutated glutamate dehydrogenase (280 kDa, Complex from Thermococcus profundus)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- 2-oxoglutaric acid (146 Da, Ligand)
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8xco
Q-score: 0.605
Wakabayashi T, Oide M, Nakasako M
Sci Rep (2024) 14 pp. 11165-11165 [ DOI: doi:10.1038/s41598-024-61793-x Pubmed: 38750092 ]
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- Water (18 Da, Ligand)
- Hexamer of glutamate dehydrogenase in the presence of nadp and glutamate (280 kDa, Complex from Thermococcus profundus)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8xcp
Q-score: 0.595
Wakabayashi T, Oide M, Nakasako M
Sci Rep (2024) 14 pp. 11165-11165 [ DOI: doi:10.1038/s41598-024-61793-x Pubmed: 38750092 ]
- Water (18 Da, Ligand)
- Hexamer of glutamate dehydrogenase in the presence of nadp and glutamate (280 kDa, Complex from Thermococcus profundus)
- Nadp nicotinamide-adenine-dinucleotide phosphate (743 Da, Ligand)
- Gamma-l-glutamic acid (147 Da, Ligand)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8xcq
Q-score: 0.606
Wakabayashi T, Oide M, Nakasako M
Sci Rep (2024) 14 pp. 11165-11165 [ DOI: doi:10.1038/s41598-024-61793-x Pubmed: 38750092 ]
- Water (18 Da, Ligand)
- Hexamer of glutamate dehydrogenase in the presence of nadp and glutamate (280 kDa, Complex from Thermococcus profundus)
- Nadp nicotinamide-adenine-dinucleotide phosphate (743 Da, Ligand)
- Gamma-l-glutamic acid (147 Da, Ligand)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8xcr
Q-score: 0.639
Wakabayashi T, Oide M, Nakasako M
Sci Rep (2024) 14 pp. 11165-11165 [ DOI: doi:10.1038/s41598-024-61793-x Pubmed: 38750092 ]
- Water (18 Da, Ligand)
- Hexamer of glutamate dehydrogenase in the presence of nadp and glutamate (280 kDa, Complex from Thermococcus profundus)
- Nadp nicotinamide-adenine-dinucleotide phosphate (743 Da, Ligand)
- Gamma-l-glutamic acid (147 Da, Ligand)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 8xcs
Q-score: 0.638
Wakabayashi T, Oide M, Nakasako M
Sci Rep (2024) 14 pp. 11165-11165 [ DOI: doi:10.1038/s41598-024-61793-x Pubmed: 38750092 ]
- Water (18 Da, Ligand)
- Hexamer of glutamate dehydrogenase in the presence of nadp and glutamate (280 kDa, Complex from Thermococcus profundus)
- Ammonium ion (18 Da, Ligand)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Glutamate dehydrogenase (46 kDa, Protein from Thermococcus profundus)
- 2-oxoglutaric acid (146 Da, Ligand)