Macaca fascicularis NTCP in complex with YN69083 Fab
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 8xcd
Q-score: 0.368
Shionoya K, Park JH, Ekimoto T, Takeuchi JS, Mifune J, Morita T, Ishimoto N, Umezawa H, Yamamoto K, Kobayashi C, Kusunoki A, Nomura N, Iwata S, Muramatsu M, Tame JRH, Ikeguchi M, Park SY, Watashi K
Nat Commun (2024) 15 pp. 9241-9241 [ Pubmed: 39455604 DOI: doi:10.1038/s41467-024-53533-6 ]
- Taurocholic acid (515 Da, Ligand)
- Solute carrier family 10 member a1 (38 kDa, Protein from Macaca fascicularis)
- Yn69083 fab light chain (23 kDa, Protein from Mus musculus)
- Yn69083 fab heavy chain (27 kDa, Protein from Mus musculus)
- Macaca fascicularis ntcp in complex with yn69083 fab (89 kDa, Complex from Macaca fascicularis)
Cryo-EM structure of human NTCP-myr-preS1-YN9048Fab complex
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8hrx
Q-score: 0.523
Asami J, Park JH, Nomura Y, Kobayashi C, Mifune J, Ishimoto N, Uemura T, Liu K, Sato Y, Zhang Z, Muramatsu M, Wakita T, Drew D, Iwata S, Shimizu T, Watashi K, Park SY, Nomura N, Ohto U
Nat Struct Mol Biol (2024) 31 pp. 447-454 [ Pubmed: 38233573 DOI: doi:10.1038/s41594-023-01191-5 ]
- Ntcp-myr-pres1-yn9048fab (Complex from Homo sapiens)
- Pres1 protein (fragment) (6 kDa, Protein from Hepatitis B virus)
- Fab heavy chain from antibody igg clone number yn9048 (26 kDa, Protein from Ondatra zibethicus)
- Sodium/bile acid cotransporter (38 kDa, Protein from Homo sapiens)
- Fab light chain from antibody igg clone number yn9048 (23 kDa, Protein from Ondatra zibethicus)
Cryo-EM structure of human NTCP-myr-preS1-YN9016Fab complex
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8hry
Q-score: 0.523
Asami J, Park JH, Nomura Y, Kobayashi C, Mifune J, Ishimoto N, Uemura T, Liu K, Sato Y, Zhang Z, Muramatsu M, Wakita T, Drew D, Iwata S, Shimizu T, Watashi K, Park SY, Nomura N, Ohto U
Nat Struct Mol Biol (2024) 31 pp. 447-454 [ Pubmed: 38233573 DOI: doi:10.1038/s41594-023-01191-5 ]
- Fab light chain from antibody igg clone number yn9016 (23 kDa, Protein from Ondatra zibethicus)
- Sodium/bile acid cotransporter (38 kDa, Protein from Homo sapiens)
- Fab heavy chain from antibody igg clone number yn9016 (25 kDa, Protein from Ondatra zibethicus)
- Large s protein (fragment) (6 kDa, Protein from Hepatitis B virus)
- Ntcp-myr-pres1-yn9016fab (Complex from Homo sapiens)
Human NTCP in complex with YN69083 Fab
Park JH, Iwamoto M, Yun JH, Uchikubo-Kamo T, Son D, Jin Z, Yoshida H, Ohki M, Ishimoto N, Mizutani K, Oshima M, Muramatsu M, Wakita T, Shirouzu M, Liu K, Uemura T, Nomura N, Iwata S, Watashi K, Tame JRH, Nishizawa T, Lee W, Park SY
Nature (2022) 606 pp. 1027-1031 [ Pubmed: 35580630 DOI: 10.1038/s41586-022-04857-0 ]
Image sets:
human NTCP in complex with YN69083 Fab
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7fci
Q-score: 0.497
Park JH, Iwamoto M, Yun JH, Uchikubo-Kamo T, Son D, Jin Z, Yoshida H, Ohki M, Ishimoto N, Mizutani K, Oshima M, Muramatsu M, Wakita T, Shirouzu M, Liu K, Uemura T, Nomura N, Iwata S, Watashi K, Tame JRH, Nishizawa T, Lee W, Park SY
Nature (2022) 606 pp. 1027-1031 [ DOI: doi:10.1038/s41586-022-04857-0 Pubmed: 35580630 ]
- Fab light chain (23 kDa, Protein from Mus musculus)
- Ntcp (Complex from Homo sapiens)
- Fab light chain,fab heavy chain (Complex from Mus musculus)
- Sodium/bile acid cotransporter (38 kDa, Protein from Homo sapiens)
- Human ntcp in complex with yn69083 (89 kDa, Cellular component)
- Fab heavy chain (27 kDa, Protein from Mus musculus)