Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class2
Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class1
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8e4y
Q-score: 0.502
Johnson ZL, Ammirati M, Wasilko DJ, Chang JS, Noell S, Foley TL, Yoon H, Smith K, Asano S, Hales K, Wan M, Yang Q, Piotrowski MA, Farley KA, Gilbert T, Aschenbrenner LM, Fennell KF, Dutra JK, Xu M, Guo C, Varghese AE, Bellenger J, Quinn A, Am Ende CW, West GM, Griffor MC, Bennett D, Calabrese M, Steppan CM, Han S, Wu H
Nat Struct Mol Biol (2023) 30 pp. 22-30 [ Pubmed: 36522428 DOI: doi:10.1038/s41594-022-00884-7 ]
- [(2r,3s,4r,5r)-5-(6-amino-9h-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methyl (3r)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(2-oxohexadecyl)sulfanyl]ethyl}amino)propyl]amino}butyl dihydrogen diphosphate (non-preferred name) (1 kDa, Ligand)
- (2r)-2-hydroxy-3-(phosphonooxy)propyl hexadecanoate (410 Da, Ligand)
- Glycerol-3-phosphate acyltransferase 1, mitochondrial (86 kDa, Protein from Homo sapiens)
- Glycerol-3-phosphate acyltransferase 1 (86 kDa, Complex from Homo sapiens)
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 8e50
Q-score: 0.444
Johnson ZL, Ammirati M, Wasilko DJ, Chang JS, Noell S, Foley TL, Yoon H, Smith K, Asano S, Hales K, Wan M, Yang Q, Piotrowski MA, Farley KA, Gilbert T, Aschenbrenner LM, Fennell KF, Dutra JK, Xu M, Guo C, Varghese AE, Bellenger J, Quinn A, Am Ende CW, West GM, Griffor MC, Bennett D, Calabrese M, Steppan CM, Han S, Wu H
Nat Struct Mol Biol (2023) 30 pp. 22-30 [ Pubmed: 36522428 DOI: doi:10.1038/s41594-022-00884-7 ]
- Coenzyme a (767 Da, Ligand)
- (2r)-2-hydroxy-3-(phosphonooxy)propyl hexadecanoate (410 Da, Ligand)
- Glycerol-3-phosphate acyltransferase 1, mitochondrial (86 kDa, Protein from Homo sapiens)
- Glycerol-3-phosphate acyltransferase 1 (86 kDa, Complex from Homo sapiens)
Dong Y, Pi X, Bartels-Burgahn F, Saltukoglu D, Liang Z, Yang J, Alt FW, Reth M, Wu H
Nature (2022) 612 pp. 156-161 [ Pubmed: 36228656 DOI: doi:10.1038/s41586-022-05412-7 ]
- Bcr complex (Complex from Mus musculus)
Resolution: 8.2 Å
EM Method: Single-particle
Fitted PDBs: 8ema
Q-score: 0.031
Dong Y, Pi X, Bartels-Burgahn F, Saltukoglu D, Liang Z, Yang J, Alt FW, Reth M, Wu H
Nature (2022) 612 pp. 156-161 [ Pubmed: 36228656 DOI: doi:10.1038/s41586-022-05412-7 ]
- Bcr complex (Complex from Mus musculus)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8e4c
Q-score: 0.232
Dong Y, Pi X, Bartels-Burgahn F, Saltukoglu D, Liang Z, Yang J, Alt FW, Reth M, Wu H
Nature (2022) 612 pp. 156-161 [ Pubmed: 36228656 DOI: doi:10.1038/s41586-022-05412-7 ]
- B-cell antigen receptor complex-associated protein beta chain (25 kDa, Protein from Mus musculus)
- Isoform 2 of immunoglobulin heavy constant mu (45 kDa, Protein from Mus musculus)
- B-cell antigen receptor complex-associated protein alpha chain,yellow fluorescent protein (42 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Bcr complex (Complex from Mus musculus)
Prepore structure of pore-forming toxin Epx1
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 7t4e
Q-score: 0.492
Xiong X, Tian S, Yang P, Lebreton F, Bao H, Sheng K, Yin L, Chen P, Zhang J, Qi W, Ruan J, Wu H, Chen H, Breault DT, Wu H, Earl AM, Gilmore MS, Abraham J, Dong M
Cell (2022) 185 pp. 1157- [ Pubmed: 35259335 DOI: doi:10.1016/j.cell.2022.02.002 ]
- Epx1 (37 kDa, Protein from Enterococcus faecalis)
- Epx1 (Complex from Enterococcus faecalis)
