CryoEM structure of nuclear GAPDH under 8h Oxidative Stress
Resolution: 2.17 Å
EM Method: Single-particle
Fitted PDBs: 8g12
Q-score: 0.585
Choi W, Wu H, Yserentant K, Huang B, Cheng Y
PNAS (2023) 120 pp. e2302471120-e2302471120 [ Pubmed: 37487103 DOI: doi:10.1073/pnas.2302471120 ]
- Gapdh (Complex from Homo)
- Glyceraldehyde-3-phosphate dehydrogenase (35 kDa, Protein from Homo sapiens)
CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8g13
Q-score: 0.633
Choi W, Wu H, Yserentant K, Huang B, Cheng Y
PNAS (2023) 120 pp. e2302471120-e2302471120 [ Pubmed: 37487103 DOI: doi:10.1073/pnas.2302471120 ]
- Gapdh (Complex from Homo sapiens)
- Glyceraldehyde-3-phosphate dehydrogenase (35 kDa, Protein from Homo sapiens)
CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress, class2
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8g14
Q-score: 0.646
Choi W, Wu H, Yserentant K, Huang B, Cheng Y
PNAS (2023) 120 pp. e2302471120-e2302471120 [ Pubmed: 37487103 DOI: doi:10.1073/pnas.2302471120 ]
- Gapdh (Complex from Homo sapiens)
- Glyceraldehyde-3-phosphate dehydrogenase (35 kDa, Protein from Homo sapiens)
CryoEM structure of nuclear GAPDH under 24h Oxidative Stress
Resolution: 2.07 Å
EM Method: Single-particle
Fitted PDBs: 8g15
Q-score: 0.657
Choi W, Wu H, Yserentant K, Huang B, Cheng Y
PNAS (2023) 120 pp. e2302471120-e2302471120 [ Pubmed: 37487103 DOI: doi:10.1073/pnas.2302471120 ]
- Gapdh (Complex from Homo sapiens)
- Glyceraldehyde-3-phosphate dehydrogenase (35 kDa, Protein from Homo sapiens)
CryoEM structure of cytoplasmic GAPDH under 24h Oxidative Stress
Resolution: 2.07 Å
EM Method: Single-particle
Fitted PDBs: 8g16
Q-score: 0.653
Choi W, Wu H, Yserentant K, Huang B, Cheng Y
PNAS (2023) 120 pp. e2302471120-e2302471120 [ Pubmed: 37487103 DOI: doi:10.1073/pnas.2302471120 ]
- Gapdh (Complex from Homo sapiens)
- Glyceraldehyde-3-phosphate dehydrogenase (35 kDa, Protein from Homo sapiens)
CryoEM structure of wild-type GAPDH
Resolution: 1.98 Å
EM Method: Single-particle
Fitted PDBs: 8g17
Q-score: 0.75
Choi W, Wu H, Yserentant K, Huang B, Cheng Y
PNAS (2023) 120 pp. e2302471120-e2302471120 [ Pubmed: 37487103 DOI: doi:10.1073/pnas.2302471120 ]
- Gapdh (Complex from Homo sapiens)
- Glyceraldehyde-3-phosphate dehydrogenase (35 kDa, Protein from Homo sapiens)
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8sun
Q-score: 0.43
Feng S, Puchades C, Ko J, Wu H, Chen Y, Figueroa EE, Gu S, Han TW, Ho B, Cheng T, Li J, Shoichet B, Jan YN, Cheng Y, Jan LY
Nat Commun (2023) 14 pp. 4874-4874 [ Pubmed: 37573365 DOI: doi:10.1038/s41467-023-40410-x ]
- Anoctamin-6 (95 kDa, Protein from Mus musculus)
- 16f (Complex from Mus musculus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 1-hydroxy-3-(trifluoromethyl)pyrido[1,2-a]benzimidazole-4-carbonitrile (277 Da, Ligand)
TMEM16F bound with Niclosamide
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8sur
Q-score: 0.46
Feng S, Puchades C, Ko J, Wu H, Chen Y, Figueroa EE, Gu S, Han TW, Ho B, Cheng T, Li J, Shoichet B, Jan YN, Cheng Y, Jan LY
Nat Commun (2023) 14 pp. 4874-4874 [ Pubmed: 37573365 DOI: doi:10.1038/s41467-023-40410-x ]
- Anoctamin-6 (106 kDa, Protein from Mus musculus)
- 5-chloro-n-(2-chloro-4-nitrophenyl)-2-hydroxybenzamide (327 Da, Ligand)
- 16f (Complex from Mus musculus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
TMEM16F, with Calcium and PIP2, no inhibitor
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8tag
Q-score: 0.452
Feng S, Puchades C, Ko J, Wu H, Chen Y, Figueroa EE, Gu S, Han TW, Ho B, Cheng T, Li J, Shoichet B, Jan YN, Cheng Y, Jan LY
Nat Commun (2023) 14 pp. 4874-4874 [ Pubmed: 37573365 DOI: doi:10.1038/s41467-023-40410-x ]
- 16f (Complex from Mus musculus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Anoctamin-6 (95 kDa, Protein from Mus musculus)
TMEM16F, with Calcium and PIP2, no inhibitor, Cl2
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8tai
Q-score: 0.466
Feng S, Puchades C, Ko J, Wu H, Chen Y, Figueroa EE, Gu S, Han TW, Ho B, Cheng T, Li J, Shoichet B, Jan YN, Cheng Y, Jan LY
Nat Commun (2023) 14 pp. 4874-4874 [ Pubmed: 37573365 DOI: doi:10.1038/s41467-023-40410-x ]
- 16f (Complex from Mus musculus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Anoctamin-6 (95 kDa, Protein from Mus musculus)