Class1 of the INO80-Hexasome complex
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8ets
Q-score: 0.473
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ DOI: doi:10.1126/science.adf4197 Pubmed: 37384669 ]
- Actin-related protein 5 (86 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ino eighty subunit 2 (3 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ruvb-like protein 1 (48 kDa, Protein from Saccharomyces cerevisiae S288C)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Chromatin-remodeling atpase ino80 (54 kDa, Protein from Saccharomyces cerevisiae S288C)
- Chromatin-remodeling complex subunit ies6 (15 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ruvb-like protein 2 (50 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ino80-hex (Complex from Saccharomyces cerevisiae)
Class2 of the INO80-Hexasome complex
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8etu
Q-score: 0.512
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ DOI: doi:10.1126/science.adf4197 Pubmed: 37384669 ]
- Actin-related protein 5 (86 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ino eighty subunit 2 (3 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ruvb-like protein 1 (48 kDa, Protein from Saccharomyces cerevisiae S288C)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Chromatin-remodeling atpase ino80 (54 kDa, Protein from Saccharomyces cerevisiae S288C)
- Chromatin-remodeling complex subunit ies6 (15 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ruvb-like protein 2 (50 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ino80-hex (Complex from Saccharomyces cerevisiae)
Class3 of INO80-Hexasome complex
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8etw
Q-score: 0.542
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ DOI: doi:10.1126/science.adf4197 Pubmed: 37384669 ]
- Actin-related protein 5 (86 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ino eighty subunit 2 (3 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ruvb-like protein 1 (48 kDa, Protein from Saccharomyces cerevisiae S288C)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Chromatin-remodeling atpase ino80 (54 kDa, Protein from Saccharomyces cerevisiae S288C)
- Chromatin-remodeling complex subunit ies6 (15 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ruvb-like protein 2 (50 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ino80-hex (Complex from Saccharomyces cerevisiae)
Class1 of the INO80-Nucleosome complex
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 8eu9
Q-score: 0.368
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ DOI: doi:10.1126/science.adf4197 Pubmed: 37384669 ]
- Chromatin-remodeling atpase ino80 (56 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ruvb-like protein 1 (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ino eighty subunit 2 (3 kDa, Protein from Saccharomyces cerevisiae S288C)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin-related protein 5 (87 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ino80-ncp (Complex from Saccharomyces cerevisiae)
- Ruvb-like protein 2 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Chromatin-remodeling complex subunit ies6 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of human METTL1-WDR4-tRNA(Phe) complex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8cth
Q-score: 0.375
Li J, Wang L, Hahn Q, Nowak RP, Viennet T, Orellana EA, Roy Burman SS, Yue H, Hunkeler M, Fontana P, Wu H, Arthanari H, Fischer ES, Gregory RI
Nature (2023) 613 pp. 391-397 [ Pubmed: 36599985 DOI: doi:10.1038/s41586-022-05566-4 ]
- Mettl1-wdr4-trna_phe complex (Complex)
- Trna (guanine-n(7)-)-methyltransferase non-catalytic subunit wdr4 (47 kDa, Protein from Homo sapiens)
- Trna (guanine-n(7)-)-methyltransferase (31 kDa, Protein from Homo sapiens)
- Mettl1-wdr4 (Complex from Homo sapiens)
- Trna_phenylalanine specific (Cellular component from Saccharomyces cerevisiae)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Phe-trna (24 kDa, RNA from Saccharomyces cerevisiae)
Cryo-EM structure of the Cdt1-MCM2-7 complex in AMPPNP state
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 5xf8
Q-score: 0.257
Zhai Y, Cheng E, Wu H, Li N, Yung PY, Gao N, Tye BK
Nat Struct Mol Biol (2017) 24 pp. 300-308 [ DOI: doi:10.1038/nsmb.3374 Pubmed: 28191894 ]
- Dna replication licensing factor mcm3 (107 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm6 (113 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm4 (105 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Minichromosome maintenance protein 5 (86 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Cell division cycle protein cdt1 (68 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm2 (98 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm7 (95 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Cdt1-mcm2-7 (Complex from Saccharomyces cerevisiae)
