Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9j1w
Q-score: 0.543
TRIF TIR Filament Cryo-EM Structure
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 9dk8
Q-score: 0.47
CryoEM structure of the TIR domain from human TRAM
Resolution: 5.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 9dlg
Q-score: 0.161
Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8usz
Q-score: 0.483
Modjarrad K, Che Y, Chen W, Wu H, Cadima CI, Muik A, Maddur MS, Tompkins KR, Martinez LT, Cai H, Ramos M, Mensah S, Cumbia B, Falcao L, McKeen AP, Chang JS, Fennell KF, Huynh KW, McLellan TJ, Sahasrabudhe PV, Chen W, Cerswell M, Garcia MA, Li S, Sharma R, Li W, Dizon KP, Duarte S, Gillett F, Smith R, Illenberger DM, Efferen KS, Vogel AB, Anderson AS, Sahin U, Swanson KA
NPJ Vaccines (2024) 9 pp. 229-229 [ DOI: doi:10.1038/s41541-024-01013-9 Pubmed: 39567521 ]
cryo-EM of Cupriavidus gilardii flagellum
Resolution: 3.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 9atb
Q-score: 0.507
Fields JL, Zhang H, Halder SK, Wu H, Wang F
To Be Published
- Flagellar filament (Complex from Cupriavidus gilardii)
- Flagellin (41 kDa, Protein from Cupriavidus gilardii)
Cryo-EM of Stenotrophomonas maltophilia flagellum
Resolution: 3.26 Å
EM Method: Helical reconstruction
Fitted PDBs: 9atl
Q-score: 0.516
Fields JL, Zhang H, Halder SK, Wu H, Wang F
To Be Published
- Flagellin (40 kDa, Protein from Stenotrophomonas maltophilia)
- Flagellar filament (Complex from Stenotrophomonas maltophilia)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9cjk
Q-score: 0.344
Xiao L, Pi X, Goss AC, El-Baba T, Ehrmann JF, Grinkevich E, Bazua-Valenti S, Padovano V, Alper SL, Carey D, Udeshi ND, Carr SA, Pablo JL, Robinson CV, Greka A, Wu H
Sci Adv (2024) 10 pp. eadp2221-eadp2221 [ DOI: doi:10.1126/sciadv.adp2221 Pubmed: 39303030 ]
- Tmed9 octamer (Complex from Homo sapiens)
- Transmembrane emp24 domain-containing protein 9 (27 kDa, Protein from Homo sapiens)
- [(2r)-2-[(e)-octadec-9-enoyl]oxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] (e)-octadec-9-enoate (1 kDa, Ligand)
Molecular basis of TMED9 dodecamer
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 9cjl
Q-score: 0.128
Xiao L, Pi X, Goss AC, El-Baba T, Ehrmann JF, Grinkevich E, Bazua-Valenti S, Padovano V, Alper SL, Carey D, Udeshi ND, Carr SA, Pablo JL, Robinson CV, Greka A, Wu H
Sci Adv (2024) 10 pp. eadp2221-eadp2221 [ DOI: doi:10.1126/sciadv.adp2221 Pubmed: 39303030 ]
- Transmembrane emp24 domain-containing protein 9 (27 kDa, Protein from Homo sapiens)
- [(2r)-2-[(e)-octadec-9-enoyl]oxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] (e)-octadec-9-enoate (1 kDa, Ligand)
- Tmed9 dodecamer (Complex from Homo sapiens)
Cryo-EM structure of CCR6 bound by SQA1 and OXM2
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 9d3e
Q-score: 0.499
Wasilko DJ, Gerstenberger BS, Farley KA, Li W, Alley J, Schnute ME, Unwalla RJ, Victorino J, Crouse KK, Ding R, Sahasrabudhe PV, Vincent F, Frisbie RK, Dermenci A, Flick A, Choi C, Chinigo G, Mousseau JJ, Trujillo JI, Nuhant P, Mondal P, Lombardo V, Lamb D, Hogan BJ, Minhas GS, Segala E, Oswald C, Windsor IW, Han S, Rappas M, Cooke RM, Calabrese MF, Berstein G, Thorarensen A, Wu H
Nat Commun (2024) 15 pp. 7574-7574 [ DOI: doi:10.1038/s41467-024-52045-7 Pubmed: 39217154 ]
- Ccr6-bril/fab/nb in complex with sqa1 and oxm2 (120 MDa, Complex from Homo sapiens)
- Human ccr6 (54 kDa, Protein from Homo sapiens)
- Anti-bril fab nanobody (15 kDa, Protein from synthetic construct)
- Anti-bril fab light chain (25 kDa, Protein from Homo sapiens)
- N-{[(2r)-4-(bicyclo[1.1.1]pentan-1-yl)-5-oxomorpholin-2-yl]methyl}-1-[4-(trifluoromethyl)phenyl]cyclopropane-1-carboxamide (408 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- 4-[[3,4-bis(oxidanylidene)-2-[[(1~{r})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{n},~{n}-dimethyl-3-oxidanyl-pyridine-2-carboxamide (426 Da, Ligand)
- Anti-bril fab heavy chain (28 kDa, Protein from Homo sapiens)
Cryo-EM structure of CCR6 bound by SQA1 and OXM1
Wasilko DJ, Gerstenberger BS, Farley KA, Li W, Alley J, Schnute ME, Unwalla RJ, Victorino J, Crouse KK, Ding R, Sahasrabudhe PV, Vincent F, Frisbie RK, Dermenci A, Flick A, Choi C, Chinigo G, Mousseau JJ, Trujillo JI, Nuhant P, Mondal P, Lombardo V, Lamb D, Hogan BJ, Minhas GS, Segala E, Oswald C, Windsor IW, Han S, Rappas M, Cooke RM, Calabrese MF, Berstein G, Thorarensen A, Wu H
Nat Commun (2024) 15 pp. 7574-7574 [ DOI: doi:10.1038/s41467-024-52045-7 Pubmed: 39217154 ]
- Ccr6, soluble cytochrome b562 (54 kDa, Protein from Homo sapiens)
- 1-(4-chlorophenyl)-n-{[(2r)-4-(2,3-dihydro-1h-inden-2-yl)-5-oxomorpholin-2-yl]methyl}cyclopropane-1-carboxamide (424 Da, Ligand)
- Anti-bril fab nanobody (15 kDa, Protein from synthetic construct)
- Anti-bril fab light chain (25 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Ccr6-bril/fab/nb in complex with sqa1 and oxm1 (120 MDa, Complex from Homo sapiens)
- 4-[[3,4-bis(oxidanylidene)-2-[[(1~{r})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{n},~{n}-dimethyl-3-oxidanyl-pyridine-2-carboxamide (426 Da, Ligand)
- Anti-bril fab heavy chain (28 kDa, Protein from Homo sapiens)