Structure of RyR2 (F/P/Ca2+ dataset)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 6jgz
Q-score: 0.249
Chi X, Gong D, Ren K, Zhou G, Huang G, Lei J, Zhou Q, Yan N
PNAS (2019) 116 pp. 25575-25582 [ Pubmed: 31792195 DOI: doi:10.1073/pnas.1914451116 ]
- Ryr2 in complex with fkbp12.6 (Complex from Sus scrofa)
- Peptidyl-prolyl cis-trans isomerase fkbp1b (11 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Ryr2 (564 kDa, Protein from Sus scrofa)
Structure of RyR2 (F/A/Ca2+ dataset)
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 6jh6
Q-score: 0.222
Chi X, Gong D, Ren K, Zhou G, Huang G, Lei J, Zhou Q, Yan N
PNAS (2019) 116 pp. 25575-25582 [ Pubmed: 31792195 DOI: doi:10.1073/pnas.1914451116 ]
- Peptidyl-prolyl cis-trans isomerase fkbp1b (11 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ryr2 in complex with fkbp12.6 (Complex from Sus scrofa)
- Ryr2 (564 kDa, Protein from Sus scrofa)
Structure of RyR2 (F/C/Ca2+ dataset)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6jhn
Q-score: 0.252
Chi X, Gong D, Ren K, Zhou G, Huang G, Lei J, Zhou Q, Yan N
PNAS (2019) 116 pp. 25575-25582 [ Pubmed: 31792195 DOI: doi:10.1073/pnas.1914451116 ]
- Peptidyl-prolyl cis-trans isomerase fkbp1b (11 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Caffeine (194 Da, Ligand)
- Ryr2 in complex with fkbp12.6 (Complex from Sus scrofa)
- Ryr2 (564 kDa, Protein from Sus scrofa)
Structure of RyR2 (F/A/C/Ca2+ dataset)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6ji0
Q-score: 0.322
Gong D, Chi X, Wei J, Zhou G, Huang G, Zhang L, Wang R, Lei J, Chen SRW, Yan N
Nature (2019) 572 pp. 347-351 [ Pubmed: 31278385 DOI: doi:10.1038/s41586-019-1377-y ]
- Peptidyl-prolyl cis-trans isomerase fkbp1b (11 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Caffeine (194 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ryr2 in complex with fkbp12.6 (Complex from Sus scrofa)
- Ryr2 (564 kDa, Protein from Sus scrofa)
Structure of RyR2 (F/A/C/L-Ca2+/apo-CaM-M dataset)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6jii
Q-score: 0.319
Gong D, Chi X, Wei J, Zhou G, Huang G, Zhang L, Wang R, Lei J, Chen SRW, Yan N
Nature (2019) 572 pp. 347-351 [ Pubmed: 31278385 DOI: doi:10.1038/s41586-019-1377-y ]
- Zinc ion (65 Da, Ligand)
- Peptidyl-prolyl cis-trans isomerase fkbp1b (11 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Caffeine (194 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ryr2 (564 kDa, Protein from Sus scrofa)
- Ryr2 in complex with fkbp12.6 and apo-calmodulin-mimicking mutant (Complex from Sus scrofa)
Structure of RyR2 (F/A/C/L-Ca2+/Ca2+CaM dataset)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6jiu
Q-score: 0.303
Gong D, Chi X, Wei J, Zhou G, Huang G, Zhang L, Wang R, Lei J, Chen SRW, Yan N
Nature (2019) 572 pp. 347-351 [ Pubmed: 31278385 DOI: doi:10.1038/s41586-019-1377-y ]
- Zinc ion (65 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Peptidyl-prolyl cis-trans isomerase fkbp1b (11 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Caffeine (194 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ryr2 in complex with fkbp12.6 and ca2+-loaded calmodulin at low ca2+ concentrations (Complex from Sus scrofa)
- Ryr2 (564 kDa, Protein from Sus scrofa)
Structure of RyR2 (P/L-Ca2+/Ca2+-CaM dataset)
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6jv2
Q-score: 0.267
Gong D, Chi X, Wei J, Zhou G, Huang G, Zhang L, Wang R, Lei J, Chen SRW, Yan N
Nature (2019) 572 pp. 347-351 [ Pubmed: 31278385 DOI: doi:10.1038/s41586-019-1377-y ]
- Zinc ion (65 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Ryr2 in complex with calmodulin (Complex from Sus scrofa)
- Ryr2 (564 kDa, Protein from Sus scrofa)
Cryo-EM structure of a P-type ATPase
Resolution: 4.11 Å
EM Method: Single-particle
Fitted PDBs: 6a69
Q-score: 0.386
Gong D, Chi X, Ren K, Huang G, Zhou G, Yan N, Lei J, Zhou Q
Nat Commun (2018) 9 pp. 3623-3623 [ DOI: doi:10.1038/s41467-018-06075-7 Pubmed: 30190470 ]
- Plasma membrane calcium-transporting atpase 1 (140 kDa, Protein from Homo sapiens)
- Complex of one pmca1 molecular with one nptn molecular (Complex from Homo sapiens)
- Neuroplastin (31 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)