CryoEM structure of human XPR1 in complex with phosphate in state A
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9j51
Q-score: 0.468
Zhang W, Chen Y, Guan Z, Wang Y, Tang M, Du Z, Zhang J, Cheng M, Zuo J, Liu Y, Wang Q, Liu Y, Zhang D, Yin P, Ma L, Liu Z
Nat Commun (2025) 16 pp. 18-18 [ DOI: doi:10.1038/s41467-024-55471-9 Pubmed: 39747008 ]
- Phosphate ion (94 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Solute carrier family 53 member 1 (84 kDa, Protein from Homo sapiens)
- Human xpr1 (Complex from Homo sapiens)
CryoEM structure of human XPR1 in complex with phosphate in state B
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9j52
Q-score: 0.468
Zhang W, Chen Y, Guan Z, Wang Y, Tang M, Du Z, Zhang J, Cheng M, Zuo J, Liu Y, Wang Q, Liu Y, Zhang D, Yin P, Ma L, Liu Z
Nat Commun (2025) 16 pp. 18-18 [ DOI: doi:10.1038/s41467-024-55471-9 Pubmed: 39747008 ]
- Phosphate ion (94 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Solute carrier family 53 member 1 (84 kDa, Protein from Homo sapiens)
- Human xpr1 (Complex from Homo sapiens)
CryoEM structure of human XPR1 in complex with phosphate in state C
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9j53
Q-score: 0.413
Zhang W, Chen Y, Guan Z, Wang Y, Tang M, Du Z, Zhang J, Cheng M, Zuo J, Liu Y, Wang Q, Liu Y, Zhang D, Yin P, Ma L, Liu Z
Nat Commun (2025) 16 pp. 18-18 [ DOI: doi:10.1038/s41467-024-55471-9 Pubmed: 39747008 ]
- Phosphate ion (94 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Solute carrier family 53 member 1 (84 kDa, Protein from Homo sapiens)
- Human xpr1 (Complex from Homo sapiens)
CryoEM structure of human XPR1 in apo state
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9j4x
Q-score: 0.554
Zhang W, Chen Y, Guan Z, Wang Y, Tang M, Du Z, Zhang J, Cheng M, Zuo J, Liu Y, Wang Q, Liu Y, Zhang D, Yin P, Ma L, Liu Z
Nat Commun (2025) 16 pp. 18-18 [ DOI: doi:10.1038/s41467-024-55471-9 Pubmed: 39747008 ]
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Solute carrier family 53 member 1 (84 kDa, Protein from Homo sapiens)
- Human xpr1 (Complex from Homo sapiens)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8z9a
Q-score: 0.54
Wang Y, Qiu L, Wang B, Guan Z, Dong Z, Zhang J, Cao S, Yang L, Wang B, Gong Z, Zhang L, Ma W, Liu Z, Zhang D, Wang G, Yin P
Science (2024) 384 pp. 1453-1460 [ Pubmed: 38870272 DOI: doi:10.1126/science.adn6881 ]
- Odorant receptor, apisorco (52 kDa, Protein from Acyrthosiphon pisum)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Or-orco heterocomplex (Complex from Acyrthosiphon pisum)
- Odorant receptor, apisor5 (42 kDa, Protein from Acyrthosiphon pisum)
- [(2e)-3,7-dimethylocta-2,6-dienyl] ethanoate (196 Da, Ligand)
Cryo-EM structure of the insect olfactory receptor OR5-Orco heterocomplex from Acyrthosiphon pisum
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8z9z
Q-score: 0.448
Wang Y, Qiu L, Wang B, Guan Z, Dong Z, Zhang J, Cao S, Yang L, Wang B, Gong Z, Zhang L, Ma W, Liu Z, Zhang D, Wang G, Yin P
Science (2024) 384 pp. 1453-1460 [ Pubmed: 38870272 DOI: doi:10.1126/science.adn6881 ]
- Odorant receptor, apisorco (52 kDa, Protein from Acyrthosiphon pisum)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Odorant receptor, apisor5 (42 kDa, Protein from Acyrthosiphon pisum)
- Or-orco heterocomplex (Complex from Acyrthosiphon pisum)
Cryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.5 angstrom
Resolution: 2.51 Å
EM Method: Single-particle
Fitted PDBs: 7xjg
Q-score: 0.515
Wang Y, Guan Z, Wang C, Nie Y, Chen Y, Qian Z, Cui Y, Xu H, Wang Q, Zhao F, Zhang D, Tao P, Sun M, Yin P, Jin S, Wu S, Zou T
Nat Microbiol (2022) 7 pp. 1480-1489 [ Pubmed: 35982312 DOI: doi:10.1038/s41564-022-01197-7 ]
- Retron-ec86 (rt-msdna-rna) (Complex from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Rna (81-mer) (25 kDa, RNA from Escherichia coli)
- Dna (105-mer) (32 kDa, DNA from Escherichia coli)
- Rna-directed dna polymerase from retron ec86 (37 kDa, Protein from Escherichia coli)
- Retron st85 family effector protein (35 kDa, Protein from Escherichia coli)
- Rna (14-mer) (4 kDa, RNA from Escherichia coli)
Cryo-EM structure of E.coli retron-Ec86 (RT-msDNA-RNA) at 3.2 angstrom
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 7v9u
Q-score: 0.471
Wang Y, Guan Z, Wang C, Nie Y, Chen Y, Qian Z, Cui Y, Xu H, Wang Q, Zhao F, Zhang D, Tao P, Sun M, Yin P, Jin S, Wu S, Zou T
Nat Microbiol (2022) 7 pp. 1480-1489 [ Pubmed: 35982312 DOI: doi:10.1038/s41564-022-01197-7 ]
- Retron-ec86 (rt-msdna-rna) (Complex from Escherichia coli)
- Rna (81-mer) (25 kDa, RNA from Escherichia coli)
- Dna (105-mer) (32 kDa, DNA from Escherichia coli)
- Rna (5'-r(p*cp*gp*up*ap*ap*gp*gp*g)-3') (4 kDa, RNA from Escherichia coli)
- Rna-directed dna polymerase from retron ec86 (36 kDa, Protein from Escherichia coli)
Cryo-EM structure of Ultraviolet-B activated UVR8 in complex with COP1
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7vgg
Q-score: 0.539
Wang Y, Wang L, Guan Z, Chang H, Ma L, Shen C, Qiu L, Yan J, Zhang D, Li J, Deng XW, Yin P
Sci Adv (2022) 8 pp. eabn3337-eabn3337 [ DOI: doi:10.1126/sciadv.abn3337 Pubmed: 35442727 ]
- Uvr8 (Complex)
- Cop1 (Complex from Arabidopsis thaliana)
- Uvr8-cop1 complex (Complex from Arabidopsis thaliana)
- Ultraviolet-b receptor uvr8 (50 kDa, Protein from Arabidopsis thaliana)
- E3 ubiquitin-protein ligase cop1 (79 kDa, Protein from Arabidopsis thaliana)