Detergent-solubilized E. coli RseP in complex with Fab
Imaizumi Y, Takanuki K, Miyake T, Takemoto M, Hirata K, Hirose M, Oi R, Kobayashi T, Miyoshi K, Aruga R, Yokoyama T, Katagiri S, Matsuura H, Iwasaki K, Kato T, Kaneko MK, Kato Y, Tajiri M, Akashi S, Nureki O, Hizukuri Y, Akiyama Y, Nogi T
Sci Adv (2022) 8 pp. eabp9011-eabp9011 [ DOI: doi:10.1126/sciadv.abp9011 Pubmed: 36001659 ]
- Rsep (Protein from Escherichia coli)
- Light chain of fab (Protein from Mus musculus)
- Rsep (Complex from Escherichia coli)
- Binary complex of e. coli rsep with fab (Complex)
- Fab (Complex from Mus musculus)
- Heavy chain of fab (Protein from Mus musculus)
Deterget-solubilized E. coli RseP(L358C) mutant in complex with Fab
Imaizumi Y, Takanuki K, Miyake T, Takemoto M, Hirata K, Hirose M, Oi R, Kobayashi T, Miyoshi K, Aruga R, Yokoyama T, Katagiri S, Matsuura H, Iwasaki K, Kato T, Kaneko MK, Kato Y, Tajiri M, Akashi S, Nureki O, Hizukuri Y, Akiyama Y, Nogi T
Sci Adv (2022) 8 pp. eabp9011-eabp9011 [ DOI: doi:10.1126/sciadv.abp9011 Pubmed: 36001659 ]
- Light chain of fab (Protein from Mus musculus)
- E. coli rsep(l358c) mutant (Protein from Escherichia coli)
- Rsep (Complex from Escherichia coli)
- Fab (Complex from Mus musculus)
- Heavy chain of fab (Protein from Mus musculus)
- Binary complex of e. coli rsep(l358c) mutant with fab (Complex)
LAT1-CD98hc complex bound to MEM-108 Fab
Resolution: 3.31 Å
EM Method: Single-particle
Fitted PDBs: 6jmq
Q-score: 0.487
Lee Y, Wiriyasermkul P, Jin C, Quan L, Ohgaki R, Okuda S, Kusakizako T, Nishizawa T, Oda K, Ishitani R, Yokoyama T, Nakane T, Shirouzu M, Endou H, Nagamori S, Kanai Y, Nureki O
Nat Struct Mol Biol (2019) 26 pp. 510-517 [ DOI: doi:10.1038/s41594-019-0237-7 Pubmed: 31160781 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Antibody (23 kDa, Protein from Mus musculus)
- Antibody (22 kDa, Protein from Mus musculus)
- Lat1-cd98hc complex bound to mem-108 fab (175 MDa, Complex from Homo sapiens)
- 4f2 cell-surface antigen heavy chain (68 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Large neutral amino acids transporter small subunit 1 (56 kDa, Protein from Homo sapiens)
CD98hc extracellular domain bound to HBJ127 Fab and MEM-108 Fab
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6jmr
Q-score: 0.398
Lee Y, Wiriyasermkul P, Jin C, Quan L, Ohgaki R, Okuda S, Kusakizako T, Nishizawa T, Oda K, Ishitani R, Yokoyama T, Nakane T, Shirouzu M, Endou H, Nagamori S, Kanai Y, Nureki O
Nat Struct Mol Biol (2019) 26 pp. 510-517 [ DOI: doi:10.1038/s41594-019-0237-7 Pubmed: 31160781 ]
- Antibody (24 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Antibody (23 kDa, Protein from Mus musculus)
- Antibody (22 kDa, Protein from Mus musculus)
- Antibody (23 kDa, Protein from Mus musculus)
- Cd98hc extracellular domain bound to mem-108 fab and hbj127 fab (225 MDa, Complex from Homo sapiens)
- 4f2 cell-surface antigen heavy chain (68 kDa, Protein from Homo sapiens)