Cryo-EM structure of E.coli membrane protein complex
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7wi3
Q-score: 0.335
Qiao Z, Yokoyama T, Yan XF, Beh IT, Shi J, Basak S, Akiyama Y, Gao YG
Cell Rep (2022) 39 pp. 110890-110890 [ Pubmed: 35649372 DOI: doi:10.1016/j.celrep.2022.110890 ]
- Modulator of ftsh protease hflc (37 kDa, Protein from Escherichia coli K-12)
- Atp-dependent zinc metalloprotease ftsh (70 kDa, Protein from Escherichia coli K-12)
- Modulator of ftsh protease hflk (45 kDa, Protein from Escherichia coli K-12)
- E.coli protein complex (Complex from Escherichia coli (strain K12))
LAT1-CD98hc complex bound to MEM-108 Fab
Resolution: 3.31 Å
EM Method: Single-particle
Fitted PDBs: 6jmq
Q-score: 0.487
Lee Y, Wiriyasermkul P, Jin C, Quan L, Ohgaki R, Okuda S, Kusakizako T, Nishizawa T, Oda K, Ishitani R, Yokoyama T, Nakane T, Shirouzu M, Endou H, Nagamori S, Kanai Y, Nureki O
Nat Struct Mol Biol (2019) 26 pp. 510-517 [ DOI: doi:10.1038/s41594-019-0237-7 Pubmed: 31160781 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Antibody (23 kDa, Protein from Mus musculus)
- Antibody (22 kDa, Protein from Mus musculus)
- Lat1-cd98hc complex bound to mem-108 fab (175 MDa, Complex from Homo sapiens)
- 4f2 cell-surface antigen heavy chain (68 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Large neutral amino acids transporter small subunit 1 (56 kDa, Protein from Homo sapiens)
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6k71
Q-score: 0.335
Kashiwagi K, Yokoyama T, Nishimoto M, Takahashi M, Sakamoto A, Yonemochi M, Shirouzu M, Ito T
Science (2019) 364 pp. 495-499 [ DOI: doi:10.1126/science.aaw4104 Pubmed: 31048492 ]
- Translation initiation factor eif-2b subunit delta (57 kDa, Protein from Homo sapiens)
- Eif2 (Complex from Homo sapiens)
- Translation initiation factor eif-2b subunit beta (39 kDa, Protein from Homo sapiens)
- Translation initiation factor eif-2b subunit alpha (33 kDa, Protein from Homo sapiens)
- Eif2b (Complex from Homo sapiens)
- Translation initiation factor eif-2b subunit gamma (50 kDa, Protein from Homo sapiens)
- Eif2b (2 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 3 (51 kDa, Protein from Homo sapiens)
- Translation initiation factor eif-2b subunit epsilon (80 kDa, Protein from Homo sapiens)
- Eif2 - eif2b (Complex)
- Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Homo sapiens)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 6k72
Q-score: 0.298
Kashiwagi K, Yokoyama T, Nishimoto M, Takahashi M, Sakamoto A, Yonemochi M, Shirouzu M, Ito T
Science (2019) 364 pp. 495-499 [ DOI: doi:10.1126/science.aaw4104 Pubmed: 31048492 ]
- Translation initiation factor eif-2b subunit delta (57 kDa, Protein from Homo sapiens)
- Eif2(ap) - eif2b (Complex)
- Translation initiation factor eif-2b subunit beta (39 kDa, Protein from Homo sapiens)
- Translation initiation factor eif-2b subunit alpha (33 kDa, Protein from Homo sapiens)
- Eif2b (Complex from Homo sapiens)
- Translation initiation factor eif-2b subunit gamma (50 kDa, Protein from Homo sapiens)
- Eif2b (2 kDa, Protein from Homo sapiens)
- Eif2(ap) (Complex from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 3 (51 kDa, Protein from Homo sapiens)
- Translation initiation factor eif-2b subunit epsilon (80 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Homo sapiens)