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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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author:"Yu EW" AND author_name:"Bonomo RA" AND assembly_molecular_weight:{500000 TO 1000000]

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EMD-23666

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A. baumannii Ribosome-Eravacycline complex: 30S

Release date: May 19, 2021
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 7m4u
Q-score: 0.587

Zhang Z, Morgan CE, Bonomo RA, Yu EW

Mbio (2021) 12 pp. e0103121-e0103121 [ Pubmed: 34044590 DOI: doi:10.1128/mBio.01031-21 ]

Sample:

30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
A baumannii 30s ribosome in complex with eravacycline (Complex from Acinetobacter baumannii AB0057)
30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
Water (18 Da, Ligand)
Eravacycline (558 Da, Ligand)
30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
Magnesium ion (24 Da, Ligand)
30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))

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EMD-21034

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Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit

Release date: Feb. 5, 2020
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6v3e
Q-score: 0.28

Morgan CE, Huang W, Rudin SD, Taylor DJ, Kirby JE, Bonomo RA, Yu EW

Mbio (2020) 11 [ DOI: doi:10.1128/mBio.03117-19 Pubmed: 31964740 ]

Sample:

30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii)
30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter sp. ANC 5600)
30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter venetianus)
30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii)
30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii)
16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii)
Acinetobacter baumannii small ribosomal subunit (2 MDa, Complex from Acinetobacter baumannii AB0057)
30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii)
30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter sp. 263903-1)

[Show more]

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Display: Statistics

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EMDB [2]

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