Cryo-electron microscopy structure of human kidney Fructose-bisphosphate aldolase B
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8d44
Q-score: 0.567
To Be Published
- Fructose-bisphosphate aldolase b (Complex from Homo sapiens)
- Fructose-bisphosphate aldolase b (39 kDa, Protein from Homo sapiens)
Cryo-electron microscopy structure of human kidney Aldehyde Dehydrogenase 1A1
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8d46
Q-score: 0.531
To Be Published
- Aldehyde dehydrogenase 1a1 (Complex from Homo sapiens)
- Retinal dehydrogenase 1 (54 kDa, Protein from Homo sapiens)
Cryo-EM structure of PfFNT-inhibitor complex
Resolution: 2.18 Å
EM Method: Single-particle
Fitted PDBs: 7mxy
Q-score: 0.586
EMBO Rep (2021) 22 pp. e51628- [ DOI: doi:10.15252/embr.202051628 Pubmed: 33471955 ]
- Formate-nitrite transporter (34 kDa, Protein from Plasmodium falciparum (isolate 3D7))
- Pffnt-inhibitor complex (Complex from Plasmodium falciparum 3D7)
- (z)-4,4,5,5,5-pentakis(fluoranyl)-1-(4-methoxy-2-oxidanyl-phenyl)-3-oxidanyl-pent-2-en-1-one (312 Da, Ligand)
- Water (18 Da, Ligand)
CryoEM Structure of the Plasmodium falciparum transporter PfFNT
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 6vqq
Q-score: 0.521
Lyu M, Su CC, Kazura JW, Yu EW
EMBO Rep (2021) 22 pp. e51628-e51628 [ DOI: doi:10.15252/embr.202051628 Pubmed: 33471955 ]
- Formate-nitrite transporter (34 kDa, Protein from Plasmodium falciparum (isolate 3D7))
- Pffnt (Complex from Plasmodium falciparum 3D7)
CryoEM Structure of the PfFNT-inhibitor complex
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 6vqr
Q-score: 0.522
CryoEM structure of Burkholderia pseudomallei hopanoid biosynthesis-associated RND transporter HpnN
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 6wu0
Q-score: 0.342
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
succinate-coenzyme Q reductase
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6wu6
Q-score: 0.353
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Succinate dehydrogenase iron-sulfur subunit (26 kDa, Protein from Escherichia coli)
- Fe3-s4 cluster (295 Da, Ligand)
- Succinate-coenzyme q reductase complex (Complex from Escherichia coli)
- Succinate dehydrogenase flavoprotein subunit (64 kDa, Protein from Escherichia coli (strain SE11))
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- Succinate dehydrogenase hydrophobic membrane anchor subunit (12 kDa, Protein from Escherichia coli 908573)
- Flavin-adenine dinucleotide (785 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Succinate dehydrogenase (14 kDa, Protein from Escherichia coli)
The Cryo-EM structure of the ubiquinol oxidase from Escherichia coli
Resolution: 2.38 Å
EM Method: Single-particle
Fitted PDBs: 6wti
Q-score: 0.591
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Cytochrome o ubiquinol oxidase (22 kDa, Protein from Escherichia coli)
- Ubiquinone-8 (727 Da, Ligand)
- Cytochrome o ubiquinol oxidase, subunit i (74 kDa, Protein from Escherichia coli)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Cytochrome o ubiquinol oxidase, subunit iv (12 kDa, Protein from Escherichia coli)
- Heme o (838 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Ubiquinol oxidase subunit 2 (34 kDa, Protein from Escherichia coli)
- Copper (ii) ion (63 Da, Ligand)
- Pentadecyl(tetradecyl)peroxyanhydride (524 Da, Ligand)
- Ubiquinol oxidase (Complex from Escherichia coli)
Cryo-EM structure of E. Coli OmpF
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 6wtz
Q-score: 0.54
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Ompf (Complex from Escherichia coli K-12)
- Water (18 Da, Ligand)
- Outer membrane porin f (39 kDa, Protein from Escherichia coli (strain K12))
Succinate: quinone oxidoreductase SQR from E.coli K12
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7jz2
Q-score: 0.51
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Fe3-s4 cluster (295 Da, Ligand)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Succinate dehydrogenase cytochrome b556 subunit (14 kDa, Protein from Escherichia coli)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- Ubiquinone-2 (318 Da, Ligand)
- Succinate dehydrogenase hydrophobic membrane anchor subunit (12 kDa, Protein from Escherichia coli)
- Succinate: quinone oxidoreductase sqr from e.coli k12 (Complex from Escherichia coli)
- Iron/sulfur cluster (351 Da, Ligand)
- Succinate dehydrogenase iron-sulfur subunit (26 kDa, Protein from Escherichia coli)
- Succinate dehydrogenase flavoprotein subunit (64 kDa, Protein from Escherichia coli)
- Flavin-adenine dinucleotide (785 Da, Ligand)