Structure of PfNT1(Y190A)-GFP in complex with GSK4
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 7ydq
Q-score: 0.31
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7wp8
Q-score: 0.441
Wu Y, Wang S, Zhang Y, Yuan L, Zheng Q, Wei M, Shi Y, Wang Z, Ma J, Wang K, Nie M, Xiao J, Huang Z, Chen P, Guo H, Lan M, Xu J, Hou W, Hong Y, Chen D, Sun H, Xiong H, Zhou M, Liu C, Guo W, Guo H, Gao J, Gan C, Li Z, Zhang H, Wang X, Li S, Cheng T, Zhao Q, Chen Y, Wu T, Zhang T, Zhang J, Cao H, Zhu H, Yuan Q, Guan Y, Xia N
Cell Host Microbe (2022) 30 pp. 1732-1744.e7 [ Pubmed: 36323313 DOI: doi:10.1016/j.chom.2022.10.011 ]
- Cryo-em structure of sars-cov-2 recombinant spike protein stfk1628x in complex with three neutralizing antibodies (Complex from Mus musculus)
- 83h7 light chain (11 kDa, Protein from Mus musculus)
- Spike glycoprotein (20 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Neutralizing antibodies (Complex from Severe acute respiratory syndrome coronavirus 2)
- 85f7 heavy chain (13 kDa, Protein from Mus musculus)
- 2b4 heavy chain (13 kDa, Protein from Mus musculus)
- 83h7 heavy chain (13 kDa, Protein from Mus musculus)
- 2b4 light chain (12 kDa, Protein from Mus musculus)
- Spike protein stfk1628x (Complex)
- 85f7 light chain (11 kDa, Protein from Mus musculus)
Resolution: 3.81 Å
EM Method: Single-particle
Fitted PDBs: 7wp6
Q-score: 0.438
Wu Y, Wang S, Zhang Y, Yuan L, Zheng Q, Wei M, Shi Y, Wang Z, Ma J, Wang K, Nie M, Xiao J, Huang Z, Chen P, Guo H, Lan M, Xu J, Hou W, Hong Y, Chen D, Sun H, Xiong H, Zhou M, Liu C, Guo W, Guo H, Gao J, Gan C, Li Z, Zhang H, Wang X, Li S, Cheng T, Zhao Q, Chen Y, Wu T, Zhang T, Zhang J, Cao H, Zhu H, Yuan Q, Guan Y, Xia N
Cell Host Microbe (2022) 30 pp. 1732-1744.e7 [ Pubmed: 36323313 DOI: doi:10.1016/j.chom.2022.10.011 ]
- Cryo-em structure of sars-cov-2 recombinant spike protein stfk in complex with three neutralizing antibodies (Complex from Mus musculus)
- 36h6 heavy chain (13 kDa, Protein from Mus musculus)
- 83h7 light chain (11 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Neutralizing antibodies (Complex from Severe acute respiratory syndrome coronavirus 2)
- 36h6 light chain (12 kDa, Protein from Mus musculus)
- Spike protein stfk (Complex)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 85f7 heavy chain (13 kDa, Protein from Mus musculus)
- 85f7 light chain (11 kDa, Protein from Mus musculus)
- 83h7 heavy chain (13 kDa, Protein from Mus musculus)
Structure of PfENT1(Y190A) in complex with nanobody 19
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 7wn0
Q-score: 0.489
Wang C, Yu L, Zhang J, Zhou Y, Sun B, Xiao Q, Zhang M, Liu H, Li J, Li J, Luo Y, Xu J, Lian Z, Lin J, Wang X, Zhang P, Guo L, Ren R, Deng D
Nat Commun (2023) 14 pp. 1727-1727 [ DOI: doi:10.1038/s41467-023-37411-1 Pubmed: 36977719 ]
- Equilibrative nucleoside/nucleobase transporter (47 kDa, Protein from Plasmodium falciparum)
- Pfent1(y190a) in complex with nanobody 19 (Complex from Plasmodium falciparum)
- Pfent1 (Complex from Vicugna pacos)
- Nanobody 19 (Complex)
- Nanobody19 (13 kDa, Protein from Vicugna pacos)
Structure of PfNT1(Y190A) in complex with nanobody 48 and inosine
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 7wn1
Q-score: 0.545
Wang C, Yu L, Zhang J, Zhou Y, Sun B, Xiao Q, Zhang M, Liu H, Li J, Li J, Luo Y, Xu J, Lian Z, Lin J, Wang X, Zhang P, Guo L, Ren R, Deng D
Nat Commun (2023) 14 pp. 1727-1727 [ DOI: doi:10.1038/s41467-023-37411-1 Pubmed: 36977719 ]
- Equilibrative nucleoside/nucleobase transporter (47 kDa, Protein from Plasmodium falciparum)
- Inosine (268 Da, Ligand)
- Structure of pfnt1(y190a) in complex with nanobody 48 and inosine (Complex from Plasmodium falciparum)
- Nanobody48 (13 kDa, Protein from Vicugna pacos)
- Pfnt1 (Complex from Vicugna pacos)
- Nanobody 48 (Complex)
S protein of Delta variant in complex with ZWD12
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7wwl
Q-score: 0.444
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ DOI: doi:10.1038/s41392-022-00987-z Pubmed: 35478188 ]
- S protein of delta variant in complex with zwd12 (Complex)
- Zwd12 (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain of zwd12 (13 kDa, Protein from Homo sapiens)
- Light chain of zwd12 (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of delta variant (Complex from Severe acute respiratory syndrome coronavirus 2)
S protein of Delta variant in complex with ZWD12 focused on RBD_ZWD12 sub-complex
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ DOI: doi:10.1038/s41392-022-00987-z Pubmed: 35478188 ]
S protein of Delta variant in complex with ZWC6
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7wwm
Q-score: 0.338
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ DOI: doi:10.1038/s41392-022-00987-z Pubmed: 35478188 ]
- Zwc6 (Complex from Homo sapiens)
- Heavy chain of zwc6 (11 kDa, Protein from Homo sapiens)
- S protein of delta variant in complex with zwc6 (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain of zwc6 (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of delta variant (Complex from Severe acute respiratory syndrome coronavirus 2)
S protein of Delta variant in complex with ZWC6 focused on RBD_ZWC6 sub-complex
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ DOI: doi:10.1038/s41392-022-00987-z Pubmed: 35478188 ]
cryo EM map of the S protein of SARS-CoV-2 in complex bound with 4A8
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7c2l
Q-score: 0.362
Chi X, Yan R, Zhang J, Zhang G, Zhang Y, Hao M, Zhang Z, Fan P, Dong Y, Yang Y, Chen Z, Guo Y, Zhang J, Li Y, Song X, Chen Y, Xia L, Fu L, Hou L, Xu J, Yu C, Li J, Zhou Q, Chen W
Science (2020) 369 pp. 650-655 [ DOI: doi:10.1126/science.abc6952 Pubmed: 32571838 ]
- Light chain of 4a8 (24 kDa, Protein from Homo sapiens)
- S protein of sars-cov-2 in complex bound with 4a8 (Complex from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain of 4a8 (50 kDa, Protein from Homo sapiens)