Electron Microscopy Data Bank

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The atomic structure of varicella-zoster virus A-capsid

Release date: July 29, 2020
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6lgl
Q-score: 0.114

Wang W, Zheng Q, Pan D, Yu H, Fu W, Liu J, He M, Zhu R, Cai Y, Huang Y, Zha Z, Chen Z, Ye X, Han J, Que Y, Wu T, Zhang J, Li S, Zhu H, Zhou ZH, Cheng T, Xia N

Nat Microbiol (2020) 5 pp. 1542-1552 [ DOI: doi:10.1038/s41564-020-0785-y Pubmed: 32895526 ]

Sample:

Triplex capsid protein 1 (54 kDa, Protein from Human herpesvirus 3)
Human alphaherpesvirus 3 (Virus from Human alphaherpesvirus 3)
Small capsomere-interacting protein (24 kDa, Protein from Human herpesvirus 3)
Major capsid protein (155 kDa, Protein from Human herpesvirus 3)
Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 3)

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EMD-0881

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The atomic structure of varicella zoster virus C-capsid

Release date: July 29, 2020
Resolution: 5.3 Å
EM Method: Single-particle
Fitted PDBs: 6lgn

Wang W, Zheng Q, Pan D, Yu H, Fu W, Liu J, He M, Zhu R, Cai Y, Huang Y, Zha Z, Chen Z, Ye X, Han J, Que Y, Wu T, Zhang J, Li S, Zhu H, Zhou ZH, Cheng T, Xia N

Nat Microbiol (2020) 5 pp. 1542-1552 [ DOI: doi:10.1038/s41564-020-0785-y Pubmed: 32895526 ]

Sample:

Triplex capsid protein 1 (54 kDa, Protein from Human herpesvirus 3)
Human alphaherpesvirus 3 (Virus from Human alphaherpesvirus 3)
Small capsomere-interacting protein (24 kDa, Protein from Human herpesvirus 3)
Major capsid protein (155 kDa, Protein from Human herpesvirus 3)
Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 3)

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EMD-30248

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CryoEM structure of VZV A-capsid, 3-fold sub-particle reconstruction

Release date: July 29, 2020
Resolution: 3.5 Å
EM Method: Single-particle

Wang W, Zheng Q, Pan D, Yu H, Fu W, Liu J, He M, Zhu R, Cai Y, Huang Y, Zha Z, Chen Z, Ye X, Han J, Que Y, Wu T, Zhang J, Li S, Zhu H, Zhou ZH, Cheng T, Xia N

Nat Microbiol (2020) 5 pp. 1542-1552 [ DOI: doi:10.1038/s41564-020-0785-y Pubmed: 32895526 ]

Sample:

Human alphaherpesvirus 3 (Virus from Human alphaherpesvirus 3)

EMD-30250

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CryoEM structure of VZV C-capsid, 3-fold sub-particle reconstruction

Release date: July 29, 2020
Resolution: 4.1 Å
EM Method: Single-particle

Wang W, Zheng Q, Pan D, Yu H, Fu W, Liu J, He M, Zhu R, Cai Y, Huang Y, Zha Z, Chen Z, Ye X, Han J, Que Y, Wu T, Zhang J, Li S, Zhu H, Zhou ZH, Cheng T, Xia N

Nat Microbiol (2020) 5 pp. 1542-1552 [ DOI: doi:10.1038/s41564-020-0785-y Pubmed: 32895526 ]

Sample:

Human alphaherpesvirus 3 (Virus from Human alphaherpesvirus 3)

EMD-30251

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CryoEM structure of VZV capsid derived from virion

Release date: July 29, 2020
Resolution: 6.3 Å
EM Method: Single-particle

Wang W, Zheng Q, Pan D, Yu H, Fu W, Liu J, He M, Zhu R, Cai Y, Huang Y, Zha Z, Chen Z, Ye X, Han J, Que Y, Wu T, Zhang J, Li S, Zhu H, Zhou ZH, Cheng T, Xia N

Nat Microbiol (2020) 5 pp. 1542-1552 [ DOI: doi:10.1038/s41564-020-0785-y Pubmed: 32895526 ]

Sample:

Human alphaherpesvirus 3 (Virus from Human alphaherpesvirus 3)

EMD-9920

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The cryo-em structure of HPV18 VLP

Release date: July 10, 2019
Resolution: 11.5 Å
EM Method: Single-particle

Chen S, Huang X, Li Y, Wang X, Pan H, Lin Z, Zheng Q, Li S, Zhang J, Xia N, Zhao Q

Eur J Pharm Biopharm (2019) 141 pp. 221-231 [ Pubmed: 31154067 DOI: doi:10.1016/j.ejpb.2019.05.027 ]

Sample:

Human papillomavirus (Virus from Human papillomavirus)

EMD-9921

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The cryo-em structure of Thimerosal-treated HPV18 VLP

Release date: July 10, 2019
Resolution: 13.0 Å
EM Method: Single-particle

Chen S, Huang X, Li Y, Wang X, Pan H, Lin Z, Zheng Q, Li S, Zhang J, Xia N, Zhao Q

Eur J Pharm Biopharm (2019) 141 pp. 221-231 [ Pubmed: 31154067 DOI: doi:10.1016/j.ejpb.2019.05.027 ]

Sample:

Human papillomavirus (Virus from Human papillomavirus)

EMD-6909

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CryoEM structure of HPV33 L1-only VLP

Release date: Oct. 10, 2018
Resolution: 10.0 Å
EM Method: Single-particle

Wei M, Wang D, Li Z, Song S, Kong X, Mo X, Yang Y, He M, Li Z, Huang B, Lin Z, Pan H, Zheng Q, Yu H, Gu Y, Zhang J, Li S, Xia N

Emerg Microbes Infect (2018) 7 pp. 160-160 [ DOI: doi:10.1038/s41426-018-0158-2 Pubmed: 30254257 ]

Sample:

Human papillomavirus type 33 (Virus from Human papillomavirus type 33)

EMD-6910

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CryoEM structure of HPV58 L1-only VLP

Release date: Oct. 10, 2018
Resolution: 12.5 Å
EM Method: Single-particle

Wei M, Wang D, Li Z, Song S, Kong X, Mo X, Yang Y, He M, Li Z, Huang B, Lin Z, Pan H, Zheng Q, Yu H, Gu Y, Zhang J, Li S, Xia N

Emerg Microbes Infect (2018) 7 pp. 160-160 [ DOI: doi:10.1038/s41426-018-0158-2 Pubmed: 30254257 ]

Sample:

Human papillomavirus type 58 (Virus from Human papillomavirus type 58)

EMD-6918

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CryoEM structure of HPV52 L1-only VLP

Release date: Oct. 10, 2018
Resolution: 7.0 Å
EM Method: Single-particle

Wei M, Wang D, Li Z, Song S, Kong X, Mo X, Yang Y, He M, Li Z, Huang B, Lin Z, Pan H, Zheng Q, Yu H, Gu Y, Zhang J, Li S, Xia N

Emerg Microbes Infect (2018) 7 pp. 160-160 [ DOI: doi:10.1038/s41426-018-0158-2 Pubmed: 30254257 ]

Sample:

Human papillomavirus type 52 (Virus from Human papillomavirus type 52)

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