S protein of Delta variant in complex with ZWD12
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7wwl
Q-score: 0.444
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ Pubmed: 35478188 DOI: doi:10.1038/s41392-022-00987-z ]
- S protein of delta variant in complex with zwd12 (Complex)
- Heavy chain of zwd12 (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of delta variant (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zwd12 (Complex from Homo sapiens)
- Light chain of zwd12 (11 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
S protein of SARS-CoV-2 in complex with 2G1
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7x08
Q-score: 0.458
Ma H, Guo Y, Tang H, Tseng CK, Wang L, Zong H, Wang Z, He Y, Chang Y, Wang S, Huang H, Ke Y, Yuan Y, Wu M, Zhang Y, Drelich A, Kempaiah KR, Peng BH, Wang A, Yang K, Yin H, Liu J, Yue Y, Xu W, Zhu S, Ji T, Zhang X, Wang Z, Li G, Liu G, Song J, Mu L, Xiang Z, Song Z, Chen H, Bian Y, Zhang B, Chen H, Zhang J, Liao Y, Zhang L, Yang L, Chen Y, Gilly J, Xiao X, Han L, Jiang H, Xie Y, Zhou Q, Zhu J
Cell Discov (2022) 8 pp. 16-16 [ Pubmed: 35169121 DOI: doi:10.1038/s41421-022-00381-7 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S protein of sars-cov-2 (Complex from Severe acute respiratory syndrome coronavirus)
- Light chain of 2g1 (22 kDa, Protein from Homo sapiens)
- S protein of sars-cov-2 in complex with 2g1 (Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- 2g1 (Complex from Homo sapiens)
- Heavy chain of 2g1 (49 kDa, Protein from Homo sapiens)
Cryo-EM structure of the Ams1 and Nbr1 complex
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 7dd9
Q-score: 0.668
Wang YY, Zhang J, Liu XM, Li Y, Sui J, Dong MQ, Ye K, Du LL
EMBO J (2021) 40 pp. e107497-e107497 [ Pubmed: 34169534 DOI: doi:10.15252/embj.2020107497 ]
- Ams1 and nbr1 fusion protein (520 kDa, Complex from Schizosaccharomyces pombe 972h-)
- Alpha-mannosidase,zz-type zinc finger-containing protein p35g2.11c,maltose/maltodextrin-binding periplasmic protein (178 kDa, Protein from Escherichia coli (strain K12))
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of the Ape4 and Nbr1 complex
Resolution: 2.26 Å
EM Method: Single-particle
Fitted PDBs: 7dde
Q-score: 0.545
Wang YY, Zhang J, Liu XM, Li Y, Sui J, Dong MQ, Ye K, Du LL
EMBO J (2021) 40 pp. e107497-e107497 [ Pubmed: 34169534 DOI: doi:10.15252/embj.2020107497 ]
- Aspartyl aminopeptidase 1,zz-type zinc finger-containing protein p35g2.11c,maltose/maltodextrin-binding periplasmic protein (102 kDa, Protein from Escherichia coli (strain K12))
- Ape4 and nbr1 fusion protein (750 kDa, Complex from Schizosaccharomyces pombe 972h-)
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
Structure of S.pombe alpha-mannosidase Ams1
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6lz1
Q-score: 0.556
FEBS Open Bio (2020) 10 pp. 2437-2451 [ DOI: doi:10.1002/2211-5463.12988 Pubmed: 32981237 ]
- Ams1 (129 kDa, Protein from Schizosaccharomyces pombe 972h-)
- Ams1 tetramer (480 kDa, Complex from Schizosaccharomyces pombe)
- Zinc ion (65 Da, Ligand)
cryo EM map of the S protein of SARS-CoV-2 in complex bound with 4A8
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7c2l
Q-score: 0.362
Chi X, Yan R, Zhang J, Zhang G, Zhang Y, Hao M, Zhang Z, Fan P, Dong Y, Yang Y, Chen Z, Guo Y, Zhang J, Li Y, Song X, Chen Y, Xia L, Fu L, Hou L, Xu J, Yu C, Li J, Zhou Q, Chen W
Science (2020) 369 pp. 650-655 [ Pubmed: 32571838 DOI: doi:10.1126/science.abc6952 ]
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of sars-cov-2 in complex bound with 4a8 (Complex from Homo sapiens)
- Heavy chain of 4a8 (50 kDa, Protein from Homo sapiens)
- Light chain of 4a8 (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)