S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8d0z
Q-score: 0.42
Changrob S, Halfmann PJ, Liu H, Torres JL, McGrath JJC, Ozorowski G, Li L, Wilbanks GD, Kuroda M, Maemura T, Huang M, Zheng NY, Turner HL, Erickson SA, Fu Y, Yasuhara A, Singh G, Monahan B, Mauldin J, Srivastava K, Simon V, Krammer F, Sather DN, Ward AB, Wilson IA, Kawaoka Y, Wilson PC
J Clin Inv (2023) 133 [ Pubmed: 36862518 DOI: doi:10.1172/JCI166844 ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S728-1157 fab heavy chain variable region (12 kDa, Protein from Homo sapiens)
- S728-1157 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- S728-1157 igg in complex with sars-cov-2-6p-mut7 s protein (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
CryoEM map of anchor 222-1C06 Fab and lateral patch 2B05 Fab binding H1 HA
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 7t3d
Q-score: 0.464
Guthmiller JJ, Han J, Utset HA, Li L, Lan LY, Henry C, Stamper CT, McMahon M, O'Dell G, Fernandez-Quintero ML, Freyn AW, Amanat F, Stovicek O, Gentles L, Richey ST, de la Pena AT, Rosado V, Dugan HL, Zheng NY, Tepora ME, Bitar DJ, Changrob S, Strohmeier S, Huang M, Garcia-Sastre A, Liedl KR, Bloom JD, Nachbagauer R, Palese P, Krammer F, Coughlan L, Ward AB, Wilson PC
Nature (2022) 602 pp. 314-320 [ Pubmed: 34942633 DOI: doi:10.1038/s41586-021-04356-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin (Complex from Influenza A virus (A/California/04/2009(H1N1)))
- Cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha (Complex from Homo sapiens)
- Hemagglutinin ha2 chain (19 kDa, Protein from Influenza A virus (A/California/04/2009(H1N1)))
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus (A/California/04/2009(H1N1)))
- Monoclonal antibodies 222-1c06 and 2b05 (Complex from Homo sapiens)
- 222-1c06 mab light chain (11 kDa, Protein from Homo sapiens)
- 222-1c06 mab heavy chain (13 kDa, Protein from Homo sapiens)
- 2b05 mab light chain (11 kDa, Protein from Homo sapiens)
- 2b05 mab heavy chain (12 kDa, Protein from Homo sapiens)
CryoEM structure of monoclonal Fab 045-09 2B05 binding the lateral patch of influenza virus H1 HA
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7mem
Q-score: 0.425
Guthmiller JJ, Han J, Li L, Freyn AW, Liu STH, Stovicek O, Stamper CT, Dugan HL, Tepora ME, Utset HA, Bitar DJ, Hamel NJ, Changrob S, Zheng NY, Huang M, Krammer F, Nachbagauer R, Palese P, Ward AB, Wilson PC
Sci Transl Med (2021) 13 [ DOI: doi:10.1126/scitranslmed.abg4535 Pubmed: 34078743 ]
- Cryoem structure of monoclonal fab 045-09 2b05 binding the lateral patch of h1 ha (Complex)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus (strain swl A/California/04/2009 H1N1))
- Hemagglutinin ha2 chain (19 kDa, Protein from Influenza A virus (strain swl A/California/04/2009 H1N1))
- Hemagglutinin (Complex from Influenza A virus (strain swl A/California/04/2009 H1N1))
- Heavy chain of monoclonal antibody 045-09 2b05 (12 kDa, Protein from Homo sapiens)
- Light chain of monoclonal antibody 045-09 2b05 (11 kDa, Protein from Homo sapiens)
- Monoclonal fab 045-09 2b05 (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)