pRib-ADP bound OsEDS1-PAD4-ADR1 complex
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 8zf0
Q-score: 0.443
Wu Y, Xu W, Zhao G, Lei Z, Li K, Liu J, Huang S, Wang J, Zhong X, Yin X, Wang Y, Zhang H, He Y, Ye Z, Meng Y, Chang X, Lin H, Wang X, Gao Y, Chai J, Parker JE, Deng Y, Zhang Y, Gao M, He Z
Science (2024) 386 pp. 1405-1412 [ DOI: doi:10.1126/science.adr2138 Pubmed: 39509474 ]
- Prib-adp bound oseds1-pad4-adr1 complex (Complex from Oryza sativa subsp. japonica)
- Rpw8 domain-containing protein (96 kDa, Protein from Oryza sativa Japonica Group)
- Eds1 (68 kDa, Protein from Oryza sativa Japonica Group)
- [(2r,3r,4r,5r)-5-(6-aminopurin-9-yl)-4-[(2s,3r,4s,5r)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]oxy-3-oxidanyl-oxolan-2-yl]methyl phosphono hydrogen phosphate (639 Da, Ligand)
- Lipase-like pad4 (71 kDa, Protein from Oryza sativa Japonica Group)
CryoEM structure of recombinant human Bri2 BRICHOS oligomers
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8rnu
Q-score: 0.098
Chen G, Wang Y, Zheng Z, Jiang W, Leppert A, Zhong X, Belorusova A, Siegal G, Jegerschold C, Koeck PJB, Abelein A, Hebert H, Knight SD, Johansson J
Protein Sci (2024) 33 pp. e5063-e5063 [ Pubmed: 38864729 DOI: doi:10.1002/pro.5063 ]
- Recombinant human bri2 brichos oligomers (205 kDa, Complex from Homo sapiens)
- Integral membrane protein 2b (13 kDa, Protein from Homo sapiens)
Cryo-EM structure of the gasdermin B pore
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 8gtn
Q-score: 0.421
Zhong X, Zeng H, Zhou Z, Su Y, Cheng H, Hou Y, She Y, Feng N, Wang J, Shao F, Ding J
Nature (2023) 616 pp. 598-605 [ DOI: doi:10.1038/s41586-023-05872-5 Pubmed: 36991125 ]
- Isoform 4 of gasdermin-b (28 kDa, Protein from Homo sapiens)
- Pore-forming protein gasdermin b (Complex from Homo sapiens)
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8h0x
Q-score: 0.614
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Biliverdine ix alpha (582 Da, Ligand)
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8h0y
Q-score: 0.59
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Biliverdine ix alpha (582 Da, Ligand)
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8h0z
Q-score: 0.56
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Biliverdine ix alpha (582 Da, Ligand)
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8h11
Q-score: 0.59
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
Resolution: 3.44681 Å
EM Method: Single-particle
Fitted PDBs: 8h12
Q-score: 0.547
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (130 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
Structure of SARS-CoV-1 Spike Protein (S/native) at pH 5.5, Closed Conformation
Resolution: 3.14182 Å
EM Method: Single-particle
Fitted PDBs: 8h15
Q-score: 0.578
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
Structure of SARS-CoV-1 Spike Protein (S/native) at pH 5.5, Open Conformation
Resolution: 3.35534 Å
EM Method: Single-particle
Fitted PDBs: 8h16
Q-score: 0.541
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ Pubmed: 37402591 DOI: doi:10.26508/lsa.202201796 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)