SARS-CoV-2 BA.2 spike RBD in complex bound with VacBB-551
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 8gs9
Q-score: 0.495
Ju B, Fan Q, Liu C, Shen S, Wang M, Guo H, Zhou B, Ge X, Zhang Z
Cell Rep (2023) 42 pp. 112532-112532 [ DOI: doi:10.1016/j.celrep.2023.112532 Pubmed: 37219999 ]
- Light chain of vacbb-551 (10 kDa, Protein from Homo sapiens)
- Vacbb-551 (Complex)
- Sars-cov-2 spike rbd (Complex from Homo sapiens)
- Spike glycoprotein (20 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Complex of sars-cov-2 spike rbd and vacbb-551 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of vacbb-551 (12 kDa, Protein from Homo sapiens)
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 7wp0
Q-score: 0.48
Ju B, Zheng Q, Guo H, Fan Q, Li T, Song S, Sun H, Shen S, Zhou X, Xue W, Cui L, Zhou B, Li S, Xia N, Zhang Z
Cell Res (2022) 32 pp. 491-494 [ DOI: doi:10.1038/s41422-022-00638-6 Pubmed: 35260792 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Vacw-209 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Ig c335_light_iglv1-40_iglj3 (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 delta s6p trimer in complex with neutralizing antibody vacw-209 (Complex from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 delta (Complex)
- Vacw-209 heavy chain (14 kDa, Protein from Homo sapiens)
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 7wp2
Q-score: 0.498
Ju B, Zheng Q, Guo H, Fan Q, Li T, Song S, Sun H, Shen S, Zhou X, Xue W, Cui L, Zhou B, Li S, Xia N, Zhang Z
Cell Res (2022) 32 pp. 491-494 [ DOI: doi:10.1038/s41422-022-00638-6 Pubmed: 35260792 ]
- Vacw-209 light chain (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 c.1.2 s6p trimer in complex with neutralizing antibody vacw-209 (Complex from Homo sapiens)
- Vacw-209 heavy chain (14 kDa, Protein from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7won
Q-score: 0.464
Ju B, Zheng Q, Guo H, Fan Q, Li T, Song S, Sun H, Shen S, Zhou X, Xue W, Cui L, Zhou B, Li S, Xia N, Zhang Z
Cell Res (2022) 32 pp. 491-494 [ DOI: doi:10.1038/s41422-022-00638-6 Pubmed: 35260792 ]
- Sars-cov-2 s2p (Complex from Homo sapiens)
- Neutralizing antibody vacw-209 (Complex)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Vacw-209 light chain (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 s2p trimer in complex with neutralizing antibody vacw-209 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Vacw-209 heavy chain (14 kDa, Protein from Homo sapiens)
Resolution: 3.77 Å
EM Method: Single-particle
Fitted PDBs: 7wp1
Q-score: 0.463
Ju B, Zheng Q, Guo H, Fan Q, Li T, Song S, Sun H, Shen S, Zhou X, Xue W, Cui L, Zhou B, Li S, Xia N, Zhang Z
Cell Res (2022) 32 pp. 491-494 [ DOI: doi:10.1038/s41422-022-00638-6 Pubmed: 35260792 ]
- Vacw-209 heavy chain (14 kDa, Protein from Homo sapiens)
- Antibody vacw-209 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Vacw-209 light chain (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 mu s6p trimer in complex with neutralizing antibody vacw-209 (Complex from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 mu (Complex)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7wp5
Q-score: 0.445
Ju B, Zheng Q, Guo H, Fan Q, Li T, Song S, Sun H, Shen S, Zhou X, Xue W, Cui L, Zhou B, Li S, Xia N, Zhang Z
Cell Res (2022) 32 pp. 491-494 [ DOI: doi:10.1038/s41422-022-00638-6 Pubmed: 35260792 ]
- Spikeprotein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron s6p trimer in complex with neutralizing antibody vacw-209 (Complex from Homo sapiens)
- Vacw-209 heavy chain (14 kDa, Protein from Homo sapiens)
- Vacw-209 light chain (11 kDa, Protein from Homo sapiens)