Cyanophage A-1(L) neck/gp7-terminator
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8kef
Q-score: 0.471
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Terminator gp8 (27 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
- Neck gp7 (14 kDa, Protein from unclassified Caudoviricetes)
Cyanophage A-1(L) neck/gp5-neck fiber
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 8keg
Q-score: 0.347
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Neck gp5 (18 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
- Neck fiber gp82n (26 kDa, Protein from unclassified Caudoviricetes)
Cyanophage A-1(L) baseplate-initiators
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8kea
Q-score: 0.578
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Central spike (29 kDa, Protein from unclassified Caudoviricetes)
- Wedge protein gp31 (42 kDa, Protein from unclassified Caudoviricetes)
- Tmp (73 kDa, Protein from unclassified Caudoviricetes)
- Hub (98 kDa, Protein from unclassified Caudoviricetes)
- Tube initiator (31 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
- Baseplate gp16 (17 kDa, Protein from unclassified Caudoviricetes)
- Sheath initiator (12 kDa, Protein from unclassified Caudoviricetes)
- Wedge protein gp32 (22 kDa, Protein from unclassified Caudoviricetes)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8kec
Q-score: 0.51
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Short tail fiber (49 kDa, Protein from unclassified Caudoviricetes)
- Long tail fiber (39 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8kee
Q-score: 0.572
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Sheath (54 kDa, Protein from unclassified Caudoviricetes)
- Tube (18 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8ts6
Q-score: 0.462
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Portal protein (60 kDa, Protein from uncultured cyanophage)
Cryo-EM structure of the full transcription activation complex NtcA-NtcB-TAC
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8h3v
Q-score: 0.191
Han SJ, Jiang YL, You LL, Shen LQ, Wu X, Yang F, Cui N, Kong WW, Sun H, Zhou K, Meng HC, Chen ZP, Chen Y, Zhang Y, Zhou CZ
Nat Struct Mol Biol (2024) 31 pp. 293-299 [ Pubmed: 38177666 DOI: doi:10.1038/s41594-023-01149-7 ]
- Dna-directed rna polymerase subunit gamma (70 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Anabaena)
- Ntcb (34 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit beta (126 kDa, Protein from Anabaena)
- Full transcription activation complex with two activators ntca and ntcb (718 kDa, Complex from Anabaena)
- Dna-directed rna polymerase subunit beta' (147 kDa, Protein from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Rna polymerase sigma factor siga (45 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit alpha (26 kDa, Protein from Anabaena)
- Ntca (24 kDa, Protein from Anabaena)
Cryo-EM structure of the transcription activation complex NtcA-TAC
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8h40
Q-score: 0.353
Han SJ, Jiang YL, You LL, Shen LQ, Wu X, Yang F, Cui N, Kong WW, Sun H, Zhou K, Meng HC, Chen ZP, Chen Y, Zhang Y, Zhou CZ
Nat Struct Mol Biol (2024) 31 pp. 293-299 [ Pubmed: 38177666 DOI: doi:10.1038/s41594-023-01149-7 ]
- Dna-directed rna polymerase subunit gamma (70 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit beta (126 kDa, Protein from Anabaena)
- Transcription activation complex with the global regulator ntca (580 kDa, Complex from Anabaena)
- Dna-directed rna polymerase subunit beta' (147 kDa, Protein from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Rna polymerase sigma factor siga (45 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit alpha (26 kDa, Protein from Anabaena)
- Ntca (24 kDa, Protein from Anabaena)
