Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8kee
Q-score: 0.572
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Sheath (54 kDa, Protein from unclassified Caudoviricetes)
- Tube (18 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8ts6
Q-score: 0.462
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Portal protein (60 kDa, Protein from uncultured cyanophage)
Cryo-EM structure of the full transcription activation complex NtcA-NtcB-TAC
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8h3v
Q-score: 0.191
Han SJ, Jiang YL, You LL, Shen LQ, Wu X, Yang F, Cui N, Kong WW, Sun H, Zhou K, Meng HC, Chen ZP, Chen Y, Zhang Y, Zhou CZ
Nat Struct Mol Biol (2024) 31 pp. 293-299 [ Pubmed: 38177666 DOI: doi:10.1038/s41594-023-01149-7 ]
- Dna-directed rna polymerase subunit gamma (70 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Anabaena)
- Ntcb (34 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit beta (126 kDa, Protein from Anabaena)
- Full transcription activation complex with two activators ntca and ntcb (718 kDa, Complex from Anabaena)
- Dna-directed rna polymerase subunit beta' (147 kDa, Protein from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Rna polymerase sigma factor siga (45 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit alpha (26 kDa, Protein from Anabaena)
- Ntca (24 kDa, Protein from Anabaena)
Cryo-EM structure of the transcription activation complex NtcA-TAC
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8h40
Q-score: 0.353
Han SJ, Jiang YL, You LL, Shen LQ, Wu X, Yang F, Cui N, Kong WW, Sun H, Zhou K, Meng HC, Chen ZP, Chen Y, Zhang Y, Zhou CZ
Nat Struct Mol Biol (2024) 31 pp. 293-299 [ Pubmed: 38177666 DOI: doi:10.1038/s41594-023-01149-7 ]
- Dna-directed rna polymerase subunit gamma (70 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit beta (126 kDa, Protein from Anabaena)
- Transcription activation complex with the global regulator ntca (580 kDa, Complex from Anabaena)
- Dna-directed rna polymerase subunit beta' (147 kDa, Protein from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Dna (125-mer) (38 kDa, DNA from Anabaena)
- Rna polymerase sigma factor siga (45 kDa, Protein from Anabaena)
- Dna-directed rna polymerase subunit alpha (26 kDa, Protein from Anabaena)
- Ntca (24 kDa, Protein from Anabaena)
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 8hdr
Q-score: 0.445
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Pam3 sheath protein (41 kDa, Protein from uncultured cyanophage)
- Pam3 connector protein (12 kDa, Protein from uncultured cyanophage)
- Pam3 tube protein (15 kDa, Protein from uncultured cyanophage)
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 terminator protein (17 kDa, Protein from uncultured cyanophage)
- Pam3 adaptor protein (13 kDa, Protein from uncultured cyanophage)
Cyanophage Pam3 baseplate proteins
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 7yfz
Q-score: 0.528
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Pam3 plug gp18 (11 kDa, Protein from uncultured cyanophage)
- Pam3 baseplate wedge gp22 (32 kDa, Protein from uncultured cyanophage)
- Pam3 hub gp19 (25 kDa, Protein from uncultured cyanophage)
- Pam3 spike gp20 (23 kDa, Protein from uncultured cyanophage)
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 baseplate wedge gp23 (26 kDa, Protein from uncultured cyanophage)
- Pam3 sheath initiator gp21 (13 kDa, Protein from uncultured cyanophage)
- Pam3 tube initiator gp17 (19 kDa, Protein from uncultured cyanophage)
Cyanophage Pam3 portal-adaptor
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 8hds
Q-score: 0.47
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 portal protein (69 kDa, Protein from uncultured cyanophage)
- Pam3 adaptor protein (13 kDa, Protein from uncultured cyanophage)
Cyanophage Pam3 capsid asymmetric unit
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 8hdt
Q-score: 0.537
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Major capsid (34 kDa, Protein from uncultured cyanophage)
- Cement (17 kDa, Protein from uncultured cyanophage)
Resolution: 3.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 8hdw
Q-score: 0.516
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 sheath protein (41 kDa, Protein from uncultured cyanophage)
- Pam3 tube (15 kDa, Protein from uncultured cyanophage)