Cyanophage A-1(L) neck/gp7-terminator
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8kef
Q-score: 0.471
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Terminator gp8 (27 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
- Neck gp7 (14 kDa, Protein from unclassified Caudoviricetes)
Cyanophage A-1(L) neck/gp5-neck fiber
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 8keg
Q-score: 0.347
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Neck gp5 (18 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
- Neck fiber gp82n (26 kDa, Protein from unclassified Caudoviricetes)
Cyanophage A-1(L) baseplate-initiators
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8kea
Q-score: 0.578
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Central spike (29 kDa, Protein from unclassified Caudoviricetes)
- Wedge protein gp31 (42 kDa, Protein from unclassified Caudoviricetes)
- Tmp (73 kDa, Protein from unclassified Caudoviricetes)
- Hub (98 kDa, Protein from unclassified Caudoviricetes)
- Tube initiator (31 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
- Baseplate gp16 (17 kDa, Protein from unclassified Caudoviricetes)
- Sheath initiator (12 kDa, Protein from unclassified Caudoviricetes)
- Wedge protein gp32 (22 kDa, Protein from unclassified Caudoviricetes)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8kec
Q-score: 0.51
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Short tail fiber (49 kDa, Protein from unclassified Caudoviricetes)
- Long tail fiber (39 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8kee
Q-score: 0.572
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Sheath (54 kDa, Protein from unclassified Caudoviricetes)
- Tube (18 kDa, Protein from unclassified Caudoviricetes)
- Unclassified caudoviricetes (Virus from unclassified Caudoviricetes)
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8ts6
Q-score: 0.462
Yu RC, Yang F, Zhang HY, Hou P, Du K, Zhu J, Cui N, Xu X, Chen Y, Li Q, Zhou CZ
Nat Commun (2024) 15 pp. 2654-2654 [ Pubmed: 38531972 DOI: doi:10.1038/s41467-024-47006-z ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Portal protein (60 kDa, Protein from uncultured cyanophage)
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 8hdr
Q-score: 0.445
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Pam3 sheath protein (41 kDa, Protein from uncultured cyanophage)
- Pam3 connector protein (12 kDa, Protein from uncultured cyanophage)
- Pam3 tube protein (15 kDa, Protein from uncultured cyanophage)
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 terminator protein (17 kDa, Protein from uncultured cyanophage)
- Pam3 adaptor protein (13 kDa, Protein from uncultured cyanophage)
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 7yfw
Q-score: 0.413
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 fiber proreins (27 kDa, Protein from uncultured cyanophage)
Cyanophage Pam3 baseplate proteins
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 7yfz
Q-score: 0.528
Yang F, Jiang YL, Zhang JT, Zhu J, Du K, Yu RC, Wei ZL, Kong WW, Cui N, Li WF, Chen Y, Li Q, Zhou CZ
PNAS (2023) 120 pp. e2213727120-e2213727120 [ Pubmed: 36656854 DOI: doi:10.1073/pnas.2213727120 ]
- Pam3 plug gp18 (11 kDa, Protein from uncultured cyanophage)
- Pam3 baseplate wedge gp22 (32 kDa, Protein from uncultured cyanophage)
- Pam3 hub gp19 (25 kDa, Protein from uncultured cyanophage)
- Pam3 spike gp20 (23 kDa, Protein from uncultured cyanophage)
- Uncultured cyanophage (Virus from uncultured cyanophage)
- Pam3 baseplate wedge gp23 (26 kDa, Protein from uncultured cyanophage)
- Pam3 sheath initiator gp21 (13 kDa, Protein from uncultured cyanophage)
- Pam3 tube initiator gp17 (19 kDa, Protein from uncultured cyanophage)