Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7xog
Q-score: 0.294
Tan S, Zhao J, Hu X, Li Y, Wu Z, Lu G, Yu Z, Du B, Liu Y, Li L, Chen Y, Li Y, Yao Y, Zhang X, Rao J, Gao G, Peng Y, Liu H, Yuan Z, Liu J, Wang Q, Hu H, Gao X, Zhou H, Yu H, Xu Y, Yu W, Feng L, Wang M, Shan C, Lu J, Lin J
Sci Bull (Beijing) (2023) 68 pp. 3192-3206 [ Pubmed: 37993332 DOI: doi:10.1016/j.scib.2023.11.024 ]
- Spike glycoprotein,peptide (142 kDa, Protein from synthetic construct)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Severe acute respiratory syndrome coronavirus (Complex from Severe acute respiratory syndrome coronavirus)
- Alpha-d-mannopyranose (180 Da, Ligand)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7xoe
Q-score: 0.301
Tan S, Zhao J, Hu X, Li Y, Wu Z, Lu G, Yu Z, Du B, Liu Y, Li L, Chen Y, Li Y, Yao Y, Zhang X, Rao J, Gao G, Peng Y, Liu H, Yuan Z, Liu J, Wang Q, Hu H, Gao X, Zhou H, Yu H, Xu Y, Yu W, Feng L, Wang M, Shan C, Lu J, Lin J
Sci Bull (Beijing) (2023) 68 pp. 3192-3206 [ Pubmed: 37993332 DOI: doi:10.1016/j.scib.2023.11.024 ]
MERS-CoV spike complex with S41 neutralizing antibody Fab Class4 (2u1d RBD with 3Fab)
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 7x25
Q-score: 0.129
Zhang S, Jia W, Zeng J, Li M, Wang Z, Zhou H, Zhang L, Wang X
Front Microbiol (2022) 13 pp. 988298-988298 [ DOI: doi:10.3389/fmicb.2022.988298 Pubmed: 36246239 ]
- Spike glycoprotein (148 kDa, Protein from Middle East respiratory syndrome-related coronavirus)
- Antibody s41 heavy chain (23 kDa, Protein from Homo sapiens)
- Antibody s41 light chain (23 kDa, Protein from Homo sapiens)
- Mers-cov spike with s41 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- S41 neutralizing antibody fab (Complex from Homo sapiens)
- Mers-cov spike (Complex)
MERS-CoV spike complex with S41 neutralizing antibody Fab Class3 (2u1d RBD with 2Fab)
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 7x28
Q-score: 0.184
Zhang S, Jia W, Zeng J, Li M, Wang Z, Zhou H, Zhang L, Wang X
Front Microbiol (2022) 13 pp. 988298-988298 [ DOI: doi:10.3389/fmicb.2022.988298 Pubmed: 36246239 ]
- Spike glycoprotein (148 kDa, Protein from Middle East respiratory syndrome-related coronavirus)
- Antibody s41 heavy chain (23 kDa, Protein from Homo sapiens)
- Antibody s41 light chain (23 kDa, Protein from Homo sapiens)
- Mers-cov spike with s41 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- S41 neutralizing antibody fab (Complex from Homo sapiens)
- Mers-cov spike (Complex)
S41 neutralizing antibody Fab(MERS-CoV)
Resolution: 3.685 Å
EM Method: Single-particle
Fitted PDBs: 7x26
Q-score: 0.427
Zhang S, Jia W, Zeng J, Li M, Wang Z, Zhou H, Zhang L, Wang X
Front Microbiol (2022) 13 pp. 988298-988298 [ DOI: doi:10.3389/fmicb.2022.988298 Pubmed: 36246239 ]
- Mers-cov spike rbd domain (Complex from Homo sapiens)
- S41 fab (Complex)
- Spike glycoprotein (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Antibody s41 heavy chain (23 kDa, Protein from Homo sapiens)
- Antibody s41 light chain (23 kDa, Protein from Homo sapiens)
- Mers-cov spike rbd domain with s41 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
MERS-CoV spike complex with S41 neutralizing antibody Fab Class2 (1u2d RBD with 2Fab)
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 7x29
Q-score: 0.447
Zhang S, Jia W, Zeng J, Li M, Wang Z, Zhou H, Zhang L, Wang X
Front Microbiol (2022) 13 pp. 988298-988298 [ DOI: doi:10.3389/fmicb.2022.988298 Pubmed: 36246239 ]
- Spike glycoprotein (148 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Antibody s41 heavy chain (23 kDa, Protein from Homo sapiens)
- Antibody s41 light chain (23 kDa, Protein from Homo sapiens)
- Mers-cov spike with s41 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- S41 neutralizing antibody fab (Complex from Homo sapiens)
- Mers-cov spike (Complex)
MERS-CoV spike complex with S41 neutralizing antibody Fab Class1 (1u2d RBD with 1Fab)
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 7x2a
Q-score: 0.209
Zhang S, Jia W, Zeng J, Li M, Wang Z, Zhou H, Zhang L, Wang X
Front Microbiol (2022) 13 pp. 988298-988298 [ DOI: doi:10.3389/fmicb.2022.988298 Pubmed: 36246239 ]
- S41 neutralizing antibody fab (Complex)
- Mers-cov spike (Complex from Homo sapiens)
- Antibody s41 heavy chain (23 kDa, Protein from Homo sapiens)
- Mers-cov spike glycoprotein (148 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Antibody s41 light chain (23 kDa, Protein from Homo sapiens)
- Mers-cov spike with s41 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 7elm
Q-score: 0.472
Yang L, Zhang L, Yin P, Ding H, Xiao Y, Zeng J, Wang W, Zhou H, Wang Q, Zhang Y, Chen Z, Yang M, Feng Y
Nat Commun (2022) 13 pp. 1931-1931 [ Pubmed: 35411005 DOI: doi:10.1038/s41467-022-29581-1 ]
- Csy-acrif24 (Complex from Pseudomonas aeruginosa)
- Crispr-associated protein csy3 (37 kDa, Protein from Pseudomonas aeruginosa)
- Rna (60-mer) (19 kDa, RNA from Pseudomonas aeruginosa)
- Type i-f crispr-associated protein csy1 (49 kDa, Protein from Pseudomonas aeruginosa)
- Type i-f crispr-associated endoribonuclease cas6/csy4 (21 kDa, Protein from Pseudomonas aeruginosa)
- Acrif24 (24 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy2 (36 kDa, Protein from Pseudomonas aeruginosa)
Structure of Csy-AcrIF24-dsDNA
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7eln
Q-score: 0.46
Yang L, Zhang L, Yin P, Ding H, Xiao Y, Zeng J, Wang W, Zhou H, Wang Q, Zhang Y, Chen Z, Yang M, Feng Y
Nat Commun (2022) 13 pp. 1931-1931 [ Pubmed: 35411005 DOI: doi:10.1038/s41467-022-29581-1 ]
- 54-mer dna (16 kDa, DNA from Pseudomonas aeruginosa)
- Csy-acrif24 (Complex)
- Crispr-associated protein csy3 (37 kDa, Protein from Pseudomonas aeruginosa)
- Rna (60-mer) (19 kDa, RNA from Pseudomonas aeruginosa)
- Type i-f crispr-associated protein csy1 (49 kDa, Protein from Pseudomonas aeruginosa)
- Dsdna (Complex)
- Type i-f crispr-associated endoribonuclease cas6/csy4 (21 kDa, Protein from Pseudomonas aeruginosa)
- Acrif24 (24 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy2 (36 kDa, Protein from Pseudomonas aeruginosa)
- 54-mer dna (16 kDa, DNA from Pseudomonas aeruginosa)
- Csy-acrif24-dsdna (Complex from Pseudomonas aeruginosa)
Structure of Csy-AcrIF24-dsDNA
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7we6
Q-score: 0.436
Yang L, Zhang L, Yin P, Ding H, Xiao Y, Zeng J, Wang W, Zhou H, Wang Q, Zhang Y, Chen Z, Yang M, Feng Y
Nat Commun (2022) 13 pp. 1931-1931 [ Pubmed: 35411005 DOI: doi:10.1038/s41467-022-29581-1 ]
- Csy-acrif24 (Complex from Pseudomonas aeruginosa)
- Crispr-associated protein csy3 (37 kDa, Protein from Pseudomonas aeruginosa)
- Type i-f crispr-associated endoribonuclease cas6/csy4 (21 kDa, Protein from Pseudomonas aeruginosa)
- Rna (60-mer) (19 kDa, RNA from Pseudomonas aeruginosa)
- Type i-f crispr-associated protein csy1 (49 kDa, Protein from Pseudomonas aeruginosa)
- Dna (5'-d(p*gp*gp*ap*tp*gp*gp*cp*tp*tp*cp*c)-3') (16 kDa, DNA from Pseudomonas aeruginosa)
- Dna-r (16 kDa, DNA from Pseudomonas aeruginosa)
- Acrif24 (24 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy2 (36 kDa, Protein from Pseudomonas aeruginosa)