Structure of Enterobacter cloacae Cap2-CdnD02 2:2 complex
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 7to3
Q-score: 0.528
Ledvina HE, Ye Q, Gu Y, Sullivan AE, Quan Y, Lau RK, Zhou H, Corbett KD, Whiteley AT
Nature (2023) 616 pp. 319-325 [ Pubmed: 36755092 DOI: doi:10.1038/s41586-022-05647-4 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine monophosphate (347 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Cyclic amp-amp-gmp synthase (45 kDa, Protein from Enterobacter cloacae)
- Cap2 (67 kDa, Protein from Enterobacter cloacae)
- Quaternary complex of cap2 and cdnd02 in a 2:2 stoichiometry, with cdnd02 substrate captured at the active site of cap2. (224 kDa, Complex from Enterobacter cloacae)
Structure of Enterobacter cloacae Cap2-CdnD02 2:1 complex
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7tqd
Q-score: 0.517
Ledvina HE, Ye Q, Gu Y, Sullivan AE, Quan Y, Lau RK, Zhou H, Corbett KD, Whiteley AT
Nature (2023) 616 pp. 319-325 [ Pubmed: 36755092 DOI: doi:10.1038/s41586-022-05647-4 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine monophosphate (347 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Cyclic amp-amp-gmp synthase (45 kDa, Protein from Enterobacter cloacae)
- Ternary complex of cap2 and cdnd02 in a 2:1 stoichiometry. (179 kDa, Complex from Enterobacter cloacae)
- Cap2 (67 kDa, Protein from Enterobacter cloacae)
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 8dk2
Q-score: 0.269
Deep A, Gu Y, Gao YQ, Ego KM, Herzik Jr MA, Zhou H, Corbett KD
Mol Cell (2022) 82 pp. 4145- [ Pubmed: 36206765 DOI: doi:10.1016/j.molcel.2022.09.008 ]
- Magnesium ion (24 Da, Ligand)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Reconstituted jetabc complex in the presence of dna and atp gamma s. (481 kDa, Complex from Pseudomonas aeruginosa PA14)
- Jeta (59 kDa, Protein from Pseudomonas aeruginosa PA14)
- Jetc (126 kDa, Protein from Pseudomonas aeruginosa PA14)
- Dna (26-mer) (8 kDa, DNA from synthetic construct)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
- Jetb (27 kDa, Protein from Pseudomonas aeruginosa PA14)
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 8dk3
Q-score: 0.495
Deep A, Gu Y, Gao YQ, Ego KM, Herzik Jr MA, Zhou H, Corbett KD
Mol Cell (2022) 82 pp. 4145- [ Pubmed: 36206765 DOI: doi:10.1016/j.molcel.2022.09.008 ]
- Magnesium ion (24 Da, Ligand)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Jeta (59 kDa, Protein from Pseudomonas aeruginosa PA14)
- Jetc head atpase domain in complex with dna, and cwhd of jeta (110 kDa, Complex from Pseudomonas aeruginosa PA14)
- Jetc (126 kDa, Protein from Pseudomonas aeruginosa PA14)
- Dna (26-mer) (8 kDa, DNA from synthetic construct)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)