Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7u2m
Q-score: 0.52
To Be Published
- Pentameric glycine receptor bound with aminomethanesulfonic acid (250 MDa, Complex from Danio rerio)
- Glycine receptor subunit alphaz1 (52 kDa, Protein from Danio rerio)
- Aminomethanesulfonic acid (111 Da, Ligand)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7u2n
Q-score: 0.503
To Be Published
- Pentameric glycine receptor bound with aminomethanesulfonic acid (250 MDa, Complex from Danio rerio)
- Glycine receptor subunit alphaz1 (52 kDa, Protein from Danio rerio)
- Aminomethanesulfonic acid (111 Da, Ligand)
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7wp8
Q-score: 0.441
Wu Y, Wang S, Zhang Y, Yuan L, Zheng Q, Wei M, Shi Y, Wang Z, Ma J, Wang K, Nie M, Xiao J, Huang Z, Chen P, Guo H, Lan M, Xu J, Hou W, Hong Y, Chen D, Sun H, Xiong H, Zhou M, Liu C, Guo W, Guo H, Gao J, Gan C, Li Z, Zhang H, Wang X, Li S, Cheng T, Zhao Q, Chen Y, Wu T, Zhang T, Zhang J, Cao H, Zhu H, Yuan Q, Guan Y, Xia N
Cell Host Microbe (2022) 30 pp. 1732-1744.e7 [ Pubmed: 36323313 DOI: doi:10.1016/j.chom.2022.10.011 ]
- 85f7 light chain (11 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 85f7 heavy chain (13 kDa, Protein from Mus musculus)
- Neutralizing antibodies (Complex from Severe acute respiratory syndrome coronavirus 2)
- Cryo-em structure of sars-cov-2 recombinant spike protein stfk1628x in complex with three neutralizing antibodies (Complex from Mus musculus)
- Spike protein stfk1628x (Complex)
- 83h7 light chain (11 kDa, Protein from Mus musculus)
- 2b4 light chain (12 kDa, Protein from Mus musculus)
- 83h7 heavy chain (13 kDa, Protein from Mus musculus)
- Spike glycoprotein (20 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2b4 heavy chain (13 kDa, Protein from Mus musculus)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7u2o
Q-score: 0.458
To Be Published
- Glycine receptor bound with aminomethanesulfonic acid (Complex from Danio rerio)
- The pentameric particle (2 MDa, Complex)
- Aminomethanesulfonic acid (111 Da, Ligand)
- Glycine receptor subunit alphaz1 (49 kDa, Protein from Danio rerio)
Resolution: 3.81 Å
EM Method: Single-particle
Fitted PDBs: 7wp6
Q-score: 0.438
Wu Y, Wang S, Zhang Y, Yuan L, Zheng Q, Wei M, Shi Y, Wang Z, Ma J, Wang K, Nie M, Xiao J, Huang Z, Chen P, Guo H, Lan M, Xu J, Hou W, Hong Y, Chen D, Sun H, Xiong H, Zhou M, Liu C, Guo W, Guo H, Gao J, Gan C, Li Z, Zhang H, Wang X, Li S, Cheng T, Zhao Q, Chen Y, Wu T, Zhang T, Zhang J, Cao H, Zhu H, Yuan Q, Guan Y, Xia N
Cell Host Microbe (2022) 30 pp. 1732-1744.e7 [ Pubmed: 36323313 DOI: doi:10.1016/j.chom.2022.10.011 ]
- 85f7 light chain (11 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 85f7 heavy chain (13 kDa, Protein from Mus musculus)
- Neutralizing antibodies (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein stfk (Complex)
- 83h7 light chain (11 kDa, Protein from Mus musculus)
- 83h7 heavy chain (13 kDa, Protein from Mus musculus)
- 36h6 light chain (12 kDa, Protein from Mus musculus)
- 36h6 heavy chain (13 kDa, Protein from Mus musculus)
- Cryo-em structure of sars-cov-2 recombinant spike protein stfk in complex with three neutralizing antibodies (Complex from Mus musculus)
Human IFT-A complex structures provide molecular insights into ciliary transport
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8fgw
Q-score: 0.406
Jiang M, Palicharla VR, Miller D, Hwang SH, Zhu H, Hixson P, Mukhopadhyay S, Sun J
Cell Res (2023) 33 pp. 288-298 [ DOI: doi:10.1038/s41422-023-00778-3 Pubmed: 36775821 ]
- Zinc ion (65 Da, Ligand)
- Wd repeat-containing protein 19 (151 kDa, Protein from Homo sapiens)
- Intraflagellar transport complex a (ift-a) (Complex from Homo sapiens)
- Intraflagellar transport protein 122 homolog (141 kDa, Protein from Homo sapiens)
- Intraflagellar transport protein 140 homolog (165 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 21b (151 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 35 (133 kDa, Protein from Homo sapiens)
- Intraflagellar transport protein 43 homolog (23 kDa, Protein from Homo sapiens)
Human IFT-A complex structures provide molecular insights into ciliary transport
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8fh3
Q-score: 0.248
Jiang M, Palicharla VR, Miller D, Hwang SH, Zhu H, Hixson P, Mukhopadhyay S, Sun J
Cell Res (2023) 33 pp. 288-298 [ DOI: doi:10.1038/s41422-023-00778-3 Pubmed: 36775821 ]
- Zinc ion (65 Da, Ligand)
- Wd repeat-containing protein 19 (151 kDa, Protein from Homo sapiens)
- Ift-a_tulp3 (Complex from Homo sapiens)
- Intraflagellar transport complex a (ift-a) (Complex from Homo sapiens)
- Intraflagellar transport protein 122 homolog (141 kDa, Protein from Homo sapiens)
- Intraflagellar transport protein 140 homolog (165 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 35 (133 kDa, Protein from Homo sapiens)
- Tubby-related protein 3 (49 kDa, Protein from Homo sapiens)
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8ef9
Q-score: 0.605
Li C, Zhu H, Jin S, Maksoud LM, Jain N, Sun J, Gao Y
Nucleic Acids Res (2023) 51 pp. 463-474 [ Pubmed: 36583344 DOI: doi:10.1093/nar/gkac1201 ]
- Dna (5'-d(*ap*gp*cp*tp*cp*tp*ap*cp*gp*gp*ap*tp*gp*c)-3') (8 kDa, DNA from Lates calcarifer)
- Ternary complex of lates calcarifer dna polymerase theta with duplex dna and incoming nucleotide (Complex from Lates calcarifer)
- Dna polymerase theta (95 kDa, Protein from Lates calcarifer)
- Dna (5'-d(*ap*gp*cp*ap*tp*cp*cp*gp*tp*ap*gp*(2da))-3') (5 kDa, DNA from Lates calcarifer)
- Magnesium ion (24 Da, Ligand)
- 2'-deoxyguanosine-5'-triphosphate (507 Da, Ligand)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8efc
Q-score: 0.492
Li C, Zhu H, Jin S, Maksoud LM, Jain N, Sun J, Gao Y
Nucleic Acids Res (2023) 51 pp. 463-474 [ Pubmed: 36583344 DOI: doi:10.1093/nar/gkac1201 ]
- Dna (5'-d(*ap*gp*cp*tp*cp*tp*ap*cp*gp*gp*ap*tp*gp*cp*cp*tp*cp*ap*cp*ap*g)-3') (8 kDa, DNA from Lates calcarifer)
- Ternary complex of lates calcarifer dna polymerase theta with duplex dna and incoming nucleotide (Complex from Lates calcarifer)
- Dna polymerase theta (95 kDa, Protein from Lates calcarifer)
- Magnesium ion (24 Da, Ligand)
- Dna (5'-d(*ap*cp*tp*gp*tp*gp*ap*gp*gp*cp*ap*tp*cp*cp*gp*tp*ap*gp*(2da))-3') (6 kDa, DNA from Lates calcarifer)
- 2'-deoxyguanosine-5'-triphosphate (507 Da, Ligand)
CryoEM structure of full length mouse TRPML2
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7dys
Q-score: 0.438
Song X, Li J, Tian M, Zhu H, Hu X, Zhang Y, Cao Y, Ye H, McCormick PJ, Zeng B, Fu Y, Duan J, Zhang J
J Biol Chem (2022) 298 pp. 101487-101487 [ Pubmed: 34915027 DOI: doi:10.1016/j.jbc.2021.101487 ]
- Trpml2 (Cellular component from Mus musculus)
- Mucolipin-2 (60 kDa, Protein from Mus musculus)