Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 6cv1
Q-score: 0.619
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Water (18 Da, Ligand)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 full virion
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 6cv2
Q-score: 0.608
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 emptied particle
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 6cv3
Q-score: 0.472
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 6cv4
Q-score: 0.55
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 6cv5
Q-score: 0.622
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Water (18 Da, Ligand)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 6cvb
Q-score: 0.678
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Water (18 Da, Ligand)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6nqd
Q-score: 0.423
Ananthaswamy N, Fang Q, AlSalmi W, Jain S, Chen Z, Klose T, Sun Y, Liu Y, Mahalingam M, Chand S, Tovanabutra S, Robb ML, Rossmann MG, Rao VB
Nat Commun (2019) 10 pp. 873-873 [ Pubmed: 30787293 DOI: doi:10.1038/s41467-019-08825-7 ]
- 8anc195 g52k5 light chain (23 kDa, Protein from Homo sapiens)
- T/f100 env trimer (Complex from Human immunodeficiency virus 1)
- T/f100 env gp120 (54 kDa, Protein from Human immunodeficiency virus 1)
- 8anc195 g52k5 heavy chain, ig gamma-1 chain (26 kDa, Protein from Homo sapiens)
- T/f100 env trimer-8anc195 fab complex (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 8anc195 fab (Complex from Homo sapiens)
- T/f100 env gp41 (20 kDa, Protein from Human immunodeficiency virus 1)
Near-atomic structure of icosahedrally averaged PBCV-1 capsid
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6ncl
Q-score: 0.426
Fang Q, Zhu D, Agarkova I, Adhikari J, Klose T, Liu Y, Chen Z, Sun Y, Gross ML, Van Etten JL, Zhang X, Rossmann MG
Nat Commun (2019) 10 pp. 388-388 [ Pubmed: 30674888 DOI: doi:10.1038/s41467-019-08319-6 ]
- P7 (29 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P1 (18 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P4 (20 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- Paramecium bursaria chlorella virus 1 (Virus from Paramecium bursaria Chlorella virus 1)
- P10 (31 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P12 (17 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P8 (19 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P13 (11 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P5 (16 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P6 (24 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P3 (19 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- Major capsid protein (48 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P14 (38 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P2 (63 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P9 (23 kDa, Protein from Paramecium bursaria Chlorella virus 1)
- P11 (23 kDa, Protein from Paramecium bursaria Chlorella virus 1)
CryoEM structure of human enterovirus D68 abortive product 1 (pH 7.2 and 4 degrees Celsius)
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 6crp
Q-score: 0.514
Liu Y, Sheng J, van Vliet ALW, Buda G, van Kuppeveld FJM, Rossmann MG
PNAS (2018) 115 pp. E12209-E12217 [ DOI: doi:10.1073/pnas.1803347115 Pubmed: 30530701 ]
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from enterovirus D68)
- Viral protein 3 (27 kDa, Protein from enterovirus D68)
- Viral protein 4 (7 kDa, Protein from enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 full native virion (pH 7.2 and 4 degrees Celsius)
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 6crr
Q-score: 0.521
Liu Y, Sheng J, van Vliet ALW, Buda G, van Kuppeveld FJM, Rossmann MG
PNAS (2018) 115 pp. E12209-E12217 [ DOI: doi:10.1073/pnas.1803347115 Pubmed: 30530701 ]
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from enterovirus D68)
- Viral protein 3 (27 kDa, Protein from enterovirus D68)
- Viral protein 4 (7 kDa, Protein from enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)