The capsid of Myoviridae Phage XM1
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7kmx
Q-score: 0.541
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
bioRxiv (2021) [ DOI: doi:10.1101/2021.12.18.469577 ]
- Vibrio phage xm1 (Virus from Vibrio phage XM1)
- Major capsid protein (35 kDa, Protein from Vibrio phage XM1)
- Minor capsid protein (16 kDa, Protein from Vibrio phage XM1)
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
bioRxiv (2021) [ DOI: doi:10.1101/2021.12.18.469577 ]
The Contracted Tail of Phage XM1
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
bioRxiv (2021) [ DOI: doi:10.1101/2021.12.18.469577 ]
The Neck region of Phage XM1 (6-fold symmetry)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7kjk
Q-score: 0.46
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
bioRxiv (2021) [ DOI: doi:10.1101/2021.12.18.469577 ]
- Tail sheath protein (53 kDa, Protein from Vibrio phage XM1)
- Tail tube protein (15 kDa, Protein from Vibrio phage XM1)
- Tail terminator protein (18 kDa, Protein from Vibrio phage XM1)
- Collar spike protein (90 kDa, Protein from Vibrio phage XM1)
- Head completion protein (13 kDa, Protein from Vibrio phage XM1)
- Vibrio phage xm1 (Virus from Vibrio phage XM1)
Myoviridae Phage XM1 Neck Region (12-fold)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7kln
Q-score: 0.455
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
bioRxiv (2021) [ DOI: doi:10.1101/2021.12.18.469577 ]
- Head completion protein, gp1 (12 kDa, Protein from Vibrio phage XM1)
- Portal protein (47 kDa, Protein from Vibrio phage XM1)
- Vibrio phage xm1 (Virus from Vibrio phage XM1)
Baseplate Complex for Myoviridae Phage XM1
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7kh1
Q-score: 0.493
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
bioRxiv (2021) [ DOI: doi:10.1101/2021.12.18.469577 ]
- Tail tube protein, gp7 (15 kDa, Protein from Vibrio phage XM1)
- Vibrio phage xm1 (Virus from Vibrio phage XM1)
- Tail sheath initiator protein, gp15 (13 kDa, Protein from Vibrio phage XM1)
- Baseplate wedge protein, gp16 (44 kDa, Protein from Vibrio phage XM1)
- Tail sheath protein, gp6 (53 kDa, Protein from Vibrio phage XM1)
- Baseplate wedge protein, gp17 (27 kDa, Protein from Vibrio phage XM1)
- Baseplate stabilizing protein, gp12 (13 kDa, Protein from Vibrio phage XM1)
- Baseplate organization protein, gp11 (27 kDa, Protein from Vibrio phage XM1)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5wk1
Q-score: 0.483
Wang Z, Hardies SC, Fokine A, Klose T, Jiang W, Cho BC, Rossmann MG
Structure (2018) 26 pp. 238-248.e3 [ Pubmed: 29290487 DOI: doi:10.1016/j.str.2017.12.001 ]
- Pseudoalteromonas phage tw1 (Virus from Pseudoalteromonas phage TW1)
- Capsid stabilizing protein (15 kDa, Protein from Pseudoalteromonas phage TW1)
- Major capsid protein (39 kDa, Protein from Pseudoalteromonas phage TW1)