Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7kcr
Q-score: 0.436
Sevvana M, Rogers TF, Miller AS, Long F, Klose T, Beutler N, Lai YC, Parren M, Walker LM, Buda G, Burton DR, Rossmann MG, Kuhn RJ
Viruses (2020) 12 [ DOI: doi:10.3390/v12121346 Pubmed: 33255202 ]
- Adi30056 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- Monoclonal antibody adi30056 (Complex from Homo sapiens)
- Zika virus in complex with monoclonal antibody adi30056 (15 MDa, Complex)
- Envelope protein e (54 kDa, Protein from Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013)
- Adi30056 fab heavy chain variable region (13 kDa, Protein from Homo sapiens)
- Membrane protein m (8 kDa, Protein from Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013)
- Zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013 (Virus from Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013)
Resolution: 6.33 Å
EM Method: Single-particle
Fitted PDBs: 6vyv
Q-score: 0.339
Powell LA, Miller A, Fox JM, Kose N, Klose T, Kim AS, Bombardi R, Tennekoon RN, Dharshan de Silva A, Carnahan RH, Diamond MS, Rossmann MG, Kuhn RJ, Crowe Jr JE
Cell Host Microbe (2020) 28 pp. 699-711.e7 [ Pubmed: 32783883 DOI: doi:10.1016/j.chom.2020.07.008 ]
- Ross river virus (strain t48) (Virus from Ross river virus (strain T48))
- E1 glycoprotein (42 kDa, Protein from Ross river virus (strain T48))
- Fab chk-265 heavy chain (23 kDa, Protein from Homo sapiens)
- E2 glycoprotein (38 kDa, Protein from Ross river virus (strain T48))
- Fab chk-265 light chain (22 kDa, Protein from Homo sapiens)
Resolution: 5.3 Å
EM Method: Single-particle
Fitted PDBs: 6w09
Q-score: 0.34
Powell LA, Miller A, Fox JM, Kose N, Klose T, Kim AS, Bombardi R, Tennekoon RN, Dharshan de Silva A, Carnahan RH, Diamond MS, Rossmann MG, Kuhn RJ, Crowe Jr JE
Cell Host Microbe (2020) 28 pp. 699-711.e7 [ Pubmed: 32783883 DOI: doi:10.1016/j.chom.2020.07.008 ]
- Chikungunya virus-fab complex (Complex)
- Fab chk-265 heavy chain (23 kDa, Protein from Homo sapiens)
- Fab chk-265 (Complex from Homo sapiens)
- E2 glycoprotein (38 kDa, Protein from Chikungunya virus)
- Fab chk-265 light chain (22 kDa, Protein from Homo sapiens)
- E3 (6 kDa, Protein from Chikungunya virus)
- Chikungunya virus (Virus from Chikungunya virus)
- E1 glycoprotein (42 kDa, Protein from Chikungunya virus)
Resolution: 5.3 Å
EM Method: Single-particle
Fitted PDBs: 6w1c
Q-score: 0.35
Powell LA, Miller A, Fox JM, Kose N, Klose T, Kim AS, Bombardi R, Tennekoon RN, Dharshan de Silva A, Carnahan RH, Diamond MS, Rossmann MG, Kuhn RJ, Crowe Jr JE
Cell Host Microbe (2020) 28 pp. 699-711.e7 [ Pubmed: 32783883 DOI: doi:10.1016/j.chom.2020.07.008 ]
- Mayaro virus (Virus from Mayaro virus)
- Fab chk-265 (Complex from Homo sapiens)
- Fab chk-265 light chain (22 kDa, Protein from Homo sapiens)
- Mayaro virus-fab chk-265 complex (Complex)
- E1 glycoprotein (41 kDa, Protein from Mayaro virus (strain Brazil))
- Fab chk-265 heavy chain (23 kDa, Protein from Homo sapiens)
- E2 glycoprotein (38 kDa, Protein from Mayaro virus (strain Brazil))
Enterovirus D68 in complex with human monoclonal antibody EV68-159
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6wds
Q-score: 0.631
Vogt MR, Fu J, Kose N, Williamson LE, Bombardi R, Setliff I, Georgiev IS, Klose T, Rossmann MG, Bochkov YA, Gern JE, Kuhn RJ, Crowe Jr JE
Sci Immunol (2020) 5 [ Pubmed: 32620559 DOI: doi:10.1126/sciimmunol.aba4902 ]
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Ev68-159 heavy chain (13 kDa, Protein from Homo sapiens)
- Human antibody ev68-159 (Complex from Homo sapiens)
- Enterovirus d68 in complex with human monoclonal antibody ev68-159 (Complex)
- Ev68-159 light chain (11 kDa, Protein from Homo sapiens)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
Enterovirus D68 in complex with human monoclonal antibody EV68-228
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6wdt
Q-score: 0.589
Vogt MR, Fu J, Kose N, Williamson LE, Bombardi R, Setliff I, Georgiev IS, Klose T, Rossmann MG, Bochkov YA, Gern JE, Kuhn RJ, Crowe Jr JE
Sci Immunol (2020) 5 [ Pubmed: 32620559 DOI: doi:10.1126/sciimmunol.aba4902 ]
- Human monoclonal antibody ev68-228 (Complex from Homo sapiens)
- Ev68-228 heavy chain (14 kDa, Protein from Homo sapiens)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Enterovirus d68 in complex with human monoclonal antibody ev68-228 (Complex)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Ev68-228 light chain (11 kDa, Protein from Homo sapiens)
- Enterovirus d68 (Virus from Enterovirus D68)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6mid
Q-score: 0.451
Long F, Doyle M, Fernandez E, Miller AS, Klose T, Sevvana M, Bryan A, Davidson E, Doranz BJ, Kuhn RJ, Diamond MS, Crowe Jr JE, Rossmann MG
PNAS (2019) 116 pp. 1591-1596 [ Pubmed: 30642974 DOI: doi:10.1073/pnas.1815432116 ]
- Zikv virion in complex with fab fragments of the potently neutralizing human monoclonal antibody zikv-195 (Complex)
- Zika virus (isolate zikv/human/french polynesia/10087pf/2013) (Virus from Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013))
- Monoclonal antibody zikv-195 light chain (11 kDa, Protein from Homo sapiens)
- Monoclonal antibody zikv-195 (Complex from Homo sapiens)
- E protein (54 kDa, Protein from Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013))
- Monoclonal antibody zikv-195 heavy chain (14 kDa, Protein from Homo sapiens)
- M protein (8 kDa, Protein from Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013))
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 5w3e
Q-score: 0.644
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ DOI: doi:10.1073/pnas.1707369114 Pubmed: 28696310 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- Viral protein 4 (7 kDa, Protein from Human rhinovirus 14)
- Water (18 Da, Ligand)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 5w3l
Q-score: 0.627
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ DOI: doi:10.1073/pnas.1707369114 Pubmed: 28696310 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- Viral protein 4 (7 kDa, Protein from Human rhinovirus 14)
- Water (18 Da, Ligand)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)
Resolution: 2.26 Å
EM Method: Single-particle
Fitted PDBs: 5w3m
Q-score: 0.69
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ DOI: doi:10.1073/pnas.1707369114 Pubmed: 28696310 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- Viral protein 4 (7 kDa, Protein from Human rhinovirus 14)
- Water (18 Da, Ligand)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)