CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 6cvb
Q-score: 0.678
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Water (18 Da, Ligand)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6nqd
Q-score: 0.423
Ananthaswamy N, Fang Q, AlSalmi W, Jain S, Chen Z, Klose T, Sun Y, Liu Y, Mahalingam M, Chand S, Tovanabutra S, Robb ML, Rossmann MG, Rao VB
Nat Commun (2019) 10 pp. 873-873 [ Pubmed: 30787293 DOI: doi:10.1038/s41467-019-08825-7 ]
- T/f100 env trimer (Complex from Human immunodeficiency virus 1)
- T/f100 env trimer-8anc195 fab complex (Complex)
- T/f100 env gp120 (54 kDa, Protein from Human immunodeficiency virus 1)
- 8anc195 g52k5 heavy chain, ig gamma-1 chain (26 kDa, Protein from Homo sapiens)
- 8anc195 g52k5 light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- T/f100 env gp41 (20 kDa, Protein from Human immunodeficiency virus 1)
- 8anc195 fab (Complex from Homo sapiens)
CryoEM structure of human enterovirus D68 abortive product 1 (pH 7.2 and 4 degrees Celsius)
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 6crp
Q-score: 0.514
Liu Y, Sheng J, van Vliet ALW, Buda G, van Kuppeveld FJM, Rossmann MG
PNAS (2018) 115 pp. E12209-E12217 [ DOI: doi:10.1073/pnas.1803347115 Pubmed: 30530701 ]
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from enterovirus D68)
- Viral protein 3 (27 kDa, Protein from enterovirus D68)
CryoEM structure of chimeric Eastern Equine Encephalitis Virus
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6mx4
Q-score: 0.267
Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG
Cell Rep (2018) 25 pp. 3136-3147.e5 [ Pubmed: 30540945 DOI: doi:10.1016/j.celrep.2018.11.067 ]
- E2 (47 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Capsid (28 kDa, Protein from Eastern equine encephalitis virus)
- E1 (47 kDa, Protein from Eastern equine encephalitis virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM reconstruction of the bacteriophage T4 isometric capsid
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 5vf3
Q-score: 0.505
Chen Z, Sun L, Zhang Z, Fokine A, Padilla-Sanchez V, Hanein D, Jiang W, Rossmann MG, Rao VB
PNAS (2017) 114 pp. E8184-E8193 [ Pubmed: 28893988 DOI: doi:10.1073/pnas.1708483114 ]
- Major capsid protein (48 kDa, Protein from Enterobacteria phage T4)
- Highly immunogenic outer capsid protein (40 kDa, Protein from Enterobacteria phage T4)
- Highly immunogenic outer capsid protein (1 kDa, Protein from Enterobacteria phage T4)
- Capsid vertex protein gp24 (45 kDa, Protein from Enterobacteria phage T4)
- Small outer capsid protein (9 kDa, Protein from Enterobacteria phage T4)
- Enterobacteria phage t4 (Virus from Enterobacteria phage T4)
CryoEM structure of the native empty particle of a human rhinovirus C
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 5jzg
Q-score: 0.562
Liu Y, Hill MG, Klose T, Chen Z, Watters K, Bochkov YA, Jiang W, Palmenberg AC, Rossmann MG
PNAS (2016) 113 pp. 8997-9002 [ DOI: doi:10.1073/pnas.1606595113 Pubmed: 27511920 ]
- Capsid protein vp1 (31 kDa, Protein from Rhinovirus C)
- Rhinovirus c15a (5 MDa, Virus from Rhinovirus C15a)
- Capsid protein vp3 (25 kDa, Protein from Rhinovirus C)
- Capsid protein vp0 (36 kDa, Protein from Rhinovirus C)