Thermoplasma acidophilum 20S proteasome alphaV24F
Chuah JJY, Daugherty MR, Smith DM
bioRxiv (2024) [ Pubmed: 38826226 DOI: doi:10.1101/2024.05.21.595185 ]
Thermoplasma acidophilum 20S proteasome - alphaV24Y
Resolution: 2.38 Å
EM Method: Single-particle
Fitted PDBs: 9buz
Q-score: 0.567
Chuah JJY, Daugherty MR, Smith DM
bioRxiv (2024) [ Pubmed: 38826226 DOI: doi:10.1101/2024.05.21.595185 ]
- Proteasome subunit beta (23 kDa, Protein from Thermoplasma acidophilum)
- Water (18 Da, Ligand)
- Thermoplasma acidophilum 20s proteasome alphav24y (700 MDa, Complex from Thermoplasma acidophilum)
- Proteasome subunit alpha (25 kDa, Protein from Thermoplasma acidophilum)
Thermoplasma acidophilum 20S proteasome - L81Y mutation in alpha subunit
Resolution: 2.28 Å
EM Method: Single-particle
Fitted PDBs: 8f66
Q-score: 0.598
Chuah JJY, Rexroad MS, Smith DM
Commun Biol (2023) 6 pp. 733-733 [ DOI: doi:10.1038/s42003-023-05123-3 Pubmed: 37454196 ]
- Proteasome subunit beta (23 kDa, Protein from Thermoplasma acidophilum)
- Thermoplasma acidophilum 20s proteasome - alphal81y mutant (700 kDa, Complex from Thermoplasma acidophilum)
- Proteasome subunit alpha (25 kDa, Protein from Thermoplasma acidophilum)
Thermoplasma acidophilum 20S proteasome - wild type
Resolution: 2.06 Å
EM Method: Single-particle
Fitted PDBs: 8f6a
Q-score: 0.629
Chuah JJY, Rexroad MS, Smith DM
Commun Biol (2023) 6 pp. 733-733 [ DOI: doi:10.1038/s42003-023-05123-3 Pubmed: 37454196 ]
- Wild-type thermoplasma acidophilum 20s proteasome (700 MDa, Complex from Thermoplasma acidophilum)
- Proteasome subunit beta (23 kDa, Protein from Thermoplasma acidophilum)
- Proteasome subunit alpha (25 kDa, Protein from Thermoplasma acidophilum)
Thermoplasma acidophilum 20S proteasome - wild type bound to ZYA
Resolution: 1.94 Å
EM Method: Single-particle
Fitted PDBs: 8f7k
Q-score: 0.634
Chuah JJY, Rexroad MS, Smith DM
Commun Biol (2023) 6 pp. 733-733 [ DOI: doi:10.1038/s42003-023-05123-3 Pubmed: 37454196 ]
- Proteasome subunit beta (22 kDa, Protein from Thermoplasma acidophilum)
- Wild-type thermoplasma acidophilum 20s proteasome bound to zya (700 MDa, Complex from Thermoplasma acidophilum)
- Proteasome subunit alpha (25 kDa, Protein from Thermoplasma acidophilum)
- N-[(benzyloxy)carbonyl]-l-tyrosyl-d-alanine (386 Da, Ligand)
Mechanism of Gate Opening in the 20S proteasome by the proteasomal ATPases
Resolution: 6.8 Å
EM Method: Single-particle
Fitted PDBs: 3c91
Q-score: 0.173
Rabl J, Smith DM, Yu Y, Chang SC, Goldberg AL, Cheng Y
Mol Cell (2008) 30 pp. 360-368 [ DOI: doi:10.1016/j.molcel.2008.03.004 Pubmed: 18471981 ]
- Thermoplasma acidophilum 20s proteasome (700 kDa, Sample)
- Archaeal 20s proteasome (700 kDa, Protein from Thermoplasma acidophilum)
Mechanism of Gate Opening in the 20S proteasome by the proteasomal ATPases
Resolution: 6.8 Å
EM Method: Single-particle
Fitted PDBs: 3c92
Q-score: 0.167
Rabl J, Smith DM, Yu Y, Chang SC, Goldberg AL, Cheng Y
Mol Cell (2008) 30 pp. 360-368 [ DOI: doi:10.1016/j.molcel.2008.03.004 Pubmed: 18471981 ]
- Thermoplasma acidophilum 20s proteasome (700 kDa, Sample)
- Archaeal 20s proteasome (700 kDa, Protein from Thermoplasma acidophilum)
3D cryo-EM Structure of Archaeal 20S Proteasome in Complex with the C-terminus of PAN
Yu Y, Smith DM, Kim HM, Rodriguez V, Goldberg AL, Cheng Y
EMBO J (2010) 29 pp. 692-702 [ Pubmed: 20019667 DOI: doi:10.1038/emboj.2009.382 ]