Unsymmetrized map of T5 phage tail tip complex, showing the monomeric Tail Completion Protein p143
J Virol (2025) 99 pp. e0137624-e0137624 [ DOI: doi:10.1128/jvi.01376-24 Pubmed: 39714170 ]
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 8bcp
Q-score: 0.304
J Virol (2024) pp. e0137624-e0137624 [ DOI: doi:10.1128/jvi.01376-24 Pubmed: 39714170 ]
- Tail tube terminator protein p142 (18 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
Resolution: 4.05 Å
EM Method: Single-particle
Fitted PDBs: 8bcu
Q-score: 0.301
J Virol (2024) pp. e0137624-e0137624 [ DOI: doi:10.1128/jvi.01376-24 Pubmed: 39714170 ]
- Tail tube terminator protein p142 (18 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : tip proteins
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 7zhj
Q-score: 0.438
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (1 MDa, Virus from Escherichia virus T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- Pore-forming tail tip protein pb2 (131 kDa, Protein from Escherichia phage T5)
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : central fibre
Resolution: 4.22 Å
EM Method: Single-particle
Fitted PDBs: 7zlv
Q-score: 0.343
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Probable central straight fiber (74 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : full complex after interaction with its bacterial receptor FhuA
Resolution: 4.29 Å
EM Method: Single-particle
Fitted PDBs: 7zn2
Q-score: 0.32
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ DOI: doi:10.1126/sciadv.ade9674 Pubmed: 36961893 ]
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Straight fiber protein pb4 (74 kDa, Protein from Escherichia phage T5)
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Pore-forming tail tip protein pb2 (131 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
Tail tip of siphophage T5 : bent fibre after interaction with its bacterial receptor FhuA
Resolution: 4.32 Å
EM Method: Single-particle
Fitted PDBs: 7zn4
Q-score: 0.372
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ DOI: doi:10.1126/sciadv.ade9674 Pubmed: 36961893 ]
- Probable central straight fiber (74 kDa, Protein from Escherichia phage T5)
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
Tail tip of siphophage T5 : full structure
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7zqb
Q-score: 0.357
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- Pore-forming tail tip protein pb2 (131 kDa, Protein from Escherichia phage T5)
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Probable central straight fiber (74 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : open cone after interaction with bacterial receptor FhuA
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7zqp
Q-score: 0.511
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Probable tape measure protein (131 kDa, Protein from Escherichia phage T5)
T5 Receptor Binding Protein pb5 in complex with its E. coli receptor FhuA
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8b14
Q-score: 0.608
Degroux S, Effantin G, Linares R, Schoehn G, Breyton C
J Virol (2023) 97 pp. e0158422-e0158422 [ DOI: doi:10.1128/jvi.01584-22 Pubmed: 36779755 ]
- [(2r,3s,4r,5r,6r)-2-[[(2r,4r,5r,6r)-6-[(1r)-1,2-bis(oxidanyl)ethyl]-4-[(2r,4r,5r,6r)-6-[(1r)-1,2-bis(oxidanyl)ethyl]-2-carboxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-carboxy-5-oxidanyl-oxan-2-yl]oxymethyl]-5-[[(3r)-3-dodecanoyloxytetradecanoyl]amino]-4-(3-nonanoyloxypropanoyloxy)-6-[[(2r,3s,4r,5r,6r)-3-oxidanyl-4-[(3s)-3-oxidanyltetradecanoyl]oxy-5-[[(3r)-3-oxidanyltridecanoyl]amino]-6-phosphonatooxy-oxan-2-yl]methoxy]oxan-3-yl] phosphate (1 kDa, Ligand)
- T5 receptor binding protein pb5 (Complex)
- Complex between t5 receptor binding protein pb5 and its e. coli receptor fhua, stabilized with detergent (150 kDa, Complex from Escherichia coli)
- Pb5 bacteriophage t5 receptor binding protein (68 kDa, Protein from Escherichia phage T5)
- E. coli receptor fhua (Complex from Escherichia virus T5)
- Fhua iron-ferrichrome transporter (79 kDa, Protein from Escherichia coli)
- Decylamine-n,n-dimethyl-n-oxide (201 Da, Ligand)