Cryo-electron microscopy of Adeno-associated virus serotype 4 at 2.2 A
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7thr
Q-score: 0.733
Zane G, Silveria M, Meyer N, White T, Duan R, Zou X, Chapman M
Acta Crystallogr D Struct Biol (2023) 79 pp. 140-153 [ Pubmed: 36762860 DOI: doi:10.1107/S2059798322012190 ]
- Water (18 Da, Ligand)
- Capsid (80 kDa, Protein from Adeno-associated virus - 4)
- Adeno-associated virus (3 MDa, Virus from Adeno-associated virus)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of AAV True Type
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7na6
Q-score: 0.531
Bennett A, Hull J, Jolinon N, Tordo J, Moss K, Binns E, Mietzsch M, Hagemann C, Linden RM, Serio A, Chipman P, Sousa D, Broecker F, Seeberger P, Henckaerts E, McKenna R, Agbandje-McKenna M
J Struct Biol (2021) 213 pp. 107795-107795 [ DOI: doi:10.1016/j.jsb.2021.107795 Pubmed: 34509611 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (4 MDa, Virus from Adeno-associated virus)
The capsid structure of empty AAVrh.10 particles
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 6o9r
Q-score: 0.602
Mietzsch M, Barnes C, Hull JA, Chipman P, Xie J, Bhattacharya N, Sousa D, McKenna R, Gao G, Agbandje-McKenna M
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01769-19 Pubmed: 31826994 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 6v1g
Q-score: 0.567
Mietzsch M, Barnes C, Hull JA, Chipman P, Xie J, Bhattacharya N, Sousa D, McKenna R, Gao G, Agbandje-McKenna M
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01769-19 Pubmed: 31826994 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Dna (5'-d(*cp*a)-3') (557 Da, DNA from synthetic construct)
- Adeno-associated virus (Virus from Adeno-associated virus)
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 6v1t
Q-score: 0.48
Mietzsch M, Barnes C, Hull JA, Chipman P, Xie J, Bhattacharya N, Sousa D, McKenna R, Gao G, Agbandje-McKenna M
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01769-19 Pubmed: 31826994 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
genome-containing AAVrh.39 particles
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 6v1z
Q-score: 0.467
Mietzsch M, Barnes C, Hull JA, Chipman P, Xie J, Bhattacharya N, Sousa D, McKenna R, Gao G, Agbandje-McKenna M
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01769-19 Pubmed: 31826994 ]
- Dna (5'-d(*cp*a)-3') (557 Da, DNA from synthetic construct)
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
Cryo-EM Reconstruction of Protease-Activateable Adeno-Associated Virus 9 (AAV9-L001)
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 6nxe
Q-score: 0.306
Guenther CM, Brun MJ, Bennett AD, Ho ML, Chen W, Zhu B, Lam M, Yamagami M, Kwon S, Bhattacharya N, Sousa D, Evans AC, Voss J, Sevick-Muraca EM, Agbandje-McKenna M, Suh J
Mol Ther (2019) 27 pp. 611-622 [ Pubmed: 30772143 DOI: doi:10.1016/j.ymthe.2019.01.015 ]
- Adeno-associated virus (Virus from Adeno-associated virus)
- Capsid protein vp1 (60 kDa, Protein from Adeno-associated virus)
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 3j4p
Q-score: 0.332
Xie Q, Spilman M, Meyer NL, Lerch TF, Stagg SM, Chapman MS
J Struct Biol (2013) 184 pp. 129-135 [ DOI: doi:10.1016/j.jsb.2013.09.004 Pubmed: 24036405 ]