Cryo-EM Structure of AAV2-R404A Variant
Resolution: 3.62 Å
EM Method: Single-particle
Fitted PDBs: 8fzn
Q-score: 0.485
To Be Published
- Adeno-associated virus 2 (3 MDa, Virus from adeno-associated virus 2)
- Capsid protein vp1 (56 kDa, Protein from Adeno-associated virus)
Cryo-EM structure of AAV True Type
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7na6
Q-score: 0.531
Bennett A, Hull J, Jolinon N, Tordo J, Moss K, Binns E, Mietzsch M, Hagemann C, Linden RM, Serio A, Chipman P, Sousa D, Broecker F, Seeberger P, Henckaerts E, McKenna R, Agbandje-McKenna M
J Struct Biol (2021) 213 pp. 107795-107795 [ DOI: doi:10.1016/j.jsb.2021.107795 Pubmed: 34509611 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (4 MDa, Virus from Adeno-associated virus)
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 7s1w
Q-score: 0.552
Mietzsch M, Yu JC, Hsi J, Chipman P, Broecker F, Fuming Z, Linhardt RJ, Seeberger PH, Heilbronn R, McKenna R, Agbandje-McKenna M
J Virol (2021) 95 pp. e0124921-e0124921 [ DOI: doi:10.1128/JVI.01249-21 Pubmed: 34549984 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Beta-d-galactopyranose (180 Da, Ligand)
- Adeno-associated virus (Virus from Adeno-associated virus)
BatAAV-10HB - genome-containing particles
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 6wft
Q-score: 0.575
Mietzsch M, Li Y, Kurian J, Smith JK, Chipman P, McKenna R, Yang L, Agbandje-McKenna M
J Struct Biol (2020) 211 pp. 107547-107547 [ DOI: doi:10.1016/j.jsb.2020.107547 Pubmed: 32522552 ]
- Vp1 capsid (57 kDa, Protein from Bat adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
- 2'-deoxyadenosine-5'-monophosphate (331 Da, Ligand)
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 6wfu
Q-score: 0.574
Mietzsch M, Li Y, Kurian J, Smith JK, Chipman P, McKenna R, Yang L, Agbandje-McKenna M
J Struct Biol (2020) 211 pp. 107547-107547 [ DOI: doi:10.1016/j.jsb.2020.107547 Pubmed: 32522552 ]
- Vp1 capsid (57 kDa, Protein from Bat adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 6v1t
Q-score: 0.48
Mietzsch M, Barnes C, Hull JA, Chipman P, Xie J, Bhattacharya N, Sousa D, McKenna R, Gao G, Agbandje-McKenna M
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01769-19 Pubmed: 31826994 ]
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
genome-containing AAVrh.39 particles
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 6v1z
Q-score: 0.467
Mietzsch M, Barnes C, Hull JA, Chipman P, Xie J, Bhattacharya N, Sousa D, McKenna R, Gao G, Agbandje-McKenna M
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01769-19 Pubmed: 31826994 ]
- Dna (5'-d(*cp*a)-3') (557 Da, DNA from synthetic construct)
- Capsid protein vp1 (58 kDa, Protein from Adeno-associated virus)
- Adeno-associated virus (Virus from Adeno-associated virus)
Cryo-EM Reconstruction of Protease-Activateable Adeno-Associated Virus 9 (AAV9-L001)
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 6nxe
Q-score: 0.306
Guenther CM, Brun MJ, Bennett AD, Ho ML, Chen W, Zhu B, Lam M, Yamagami M, Kwon S, Bhattacharya N, Sousa D, Evans AC, Voss J, Sevick-Muraca EM, Agbandje-McKenna M, Suh J
Mol Ther (2019) 27 pp. 611-622 [ Pubmed: 30772143 DOI: doi:10.1016/j.ymthe.2019.01.015 ]
- Adeno-associated virus (Virus from Adeno-associated virus)
- Capsid protein vp1 (60 kDa, Protein from Adeno-associated virus)