Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 8pbb
Q-score: 0.655
Schmidt FV, Schulz L, Zarzycki J, Prinz S, Oehlmann NN, Erb TJ, Rebelein JG
Nat Struct Mol Biol (2024) 31 pp. 150-158 [ Pubmed: 38062208 DOI: doi:10.1038/s41594-023-01124-2 ]
- Fe(8)-s(7) cluster (671 Da, Ligand)
- Nitrogenase iron-iron protein, beta subunit (50 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Nitrogenase protein alpha chain (60 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Chapso treated partial catalytic component (comprising only anfd & anfk, lacking anfg and fefeco) of iron nitrogenase from rhodobacter capsulatus (Complex from Rhodobacter capsulatus SB 1003)
R. capsulatus cyt bc1 (CIII2) at 3.3A
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6xi0
Q-score: 0.48
Steimle S, van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F
Nat Commun (2021) 12 pp. 929-929 [ Pubmed: 33568648 DOI: doi:10.1038/s41467-021-21051-4 ]
- Cytochrome b (49 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Cytochrome c1 (30 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Homodimer of ubiquinol:cytochrome c reductase (complex iii or cyt bc1 complex) (250 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Heme c (618 Da, Ligand)
- Ubiquinol-cytochrome c reductase iron-sulfur subunit (20 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
R. capsulatus cyt bc1 with both FeS proteins in c position (CIII2 c-c)
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 6xkt
Q-score: 0.418
Steimle S, van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F
Nat Commun (2021) 12 pp. 929-929 [ Pubmed: 33568648 DOI: doi:10.1038/s41467-021-21051-4 ]
- Cytochrome b (49 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Cytochrome c1 (30 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Homodimer of ubiquinol:cytochrome c reductase (complex iii or cyt bc1 complex) (250 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Heme c (618 Da, Ligand)
- Ubiquinol-cytochrome c reductase iron-sulfur subunit (20 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6xku
Q-score: 0.342
Steimle S, van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F
Nat Commun (2021) 12 pp. 929-929 [ Pubmed: 33568648 DOI: doi:10.1038/s41467-021-21051-4 ]
- Cytochrome b (49 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Cytochrome c1 (30 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Heme c (618 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ubiquinol:cytochrome c reductase (complex iii or cyt bc1 complex) (250 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Ubiquinol-cytochrome c reductase iron-sulfur subunit (20 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
R. capsulatus cyt bc1 with both FeS proteins in b position (CIII2 b-b)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6xkv
Q-score: 0.444
Steimle S, van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F
Nat Commun (2021) 12 pp. 929-929 [ Pubmed: 33568648 DOI: doi:10.1038/s41467-021-21051-4 ]
- Cytochrome b (49 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Cytochrome c1 (30 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))
- Heme c (618 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ubiquinol:cytochrome c reductase (complex iii or cyt bc1 complex) (250 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Ubiquinol-cytochrome c reductase iron-sulfur subunit (20 kDa, Protein from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003))