In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state
Resolution: 38.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8bwy
Q-score: 0.036
Zimmermann N, Noga A, Obbineni JM, Ishikawa T
EMBO J (2023) 42 pp. e112466-e112466 [ Pubmed: 37051721 DOI: doi:10.15252/embj.2022112466 ]
- Dynein light chain (12 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain tctex-type 1 protein (13 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain roadblock-type 2 protein (14 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar outer dynein arm intermediate protein, putative (77 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (10 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein heavy chain, outer arm protein (534 kDa, Protein from Chlamydomonas reinhardtii)
- Thioredoxin (12 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (10 kDa, Protein from Chlamydomonas reinhardtii)
- Calmodulin (35 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain 2a (15 kDa, Protein from Chlamydomonas reinhardtii)
- Docking complex 1/2 protein (11 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (12 kDa, Protein from Chlamydomonas reinhardtii)
- Outer arm dynein beta heavy chain (530 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (10 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein intermediate chain 2 (77 kDa, Protein from Chlamydomonas reinhardtii)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- In situ outer dynein arm (Cellular component from Chlamydomonas reinhardtii)
- Dynein light chain roadblock-type 2 protein (18 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (13 kDa, Protein from Chlamydomonas reinhardtii)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dynein-1-alpha heavy chain, flagellar inner arm i1 complex protein, putative (475 kDa, Protein from Chlamydomonas reinhardtii)
In situ outer dynein arm from Chlamydomonas reinhardtii in the post-power stroke state
Resolution: 30.3 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8bx8
Q-score: 0.043
Zimmermann N, Noga A, Obbineni JM, Ishikawa T
EMBO J (2023) 42 pp. e112466-e112466 [ Pubmed: 37051721 DOI: doi:10.15252/embj.2022112466 ]
- Dynein heavy chain, outer arm protein (534 kDa, Protein from Tetrahymena thermophila)
- Flagellar outer dynein arm intermediate protein, putative (77 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (11 kDa, Protein from Tetrahymena thermophila)
- Thioredoxin (14 kDa, Protein from Tetrahymena thermophila)
- Dynein-1-alpha heavy chain, flagellar inner arm i1 complex protein, putative (475 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (10 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain 4a (17 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain tctex-type 1 protein (13 kDa, Protein from Tetrahymena thermophila)
- Outer arm dynein beta heavy chain (530 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain roadblock-type 2 protein (14 kDa, Protein from Tetrahymena thermophila)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dynein light chain (10 kDa, Protein from Tetrahymena thermophila)
- In situ outer dynein arm (Cellular component from Chlamydomonas reinhardtii)
- Dynein light chain (10 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (12 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain roadblock-type 2 protein (18 kDa, Protein from Tetrahymena thermophila)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dynein light chain 1 (22 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain 2a (15 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (12 kDa, Protein from Tetrahymena thermophila)
- Magnesium ion (24 Da, Ligand)
- Dynein intermediate chain 2 (76 kDa, Protein from Tetrahymena thermophila)
In situ outer dynein arm from Chlamydomonas reinhardtii in an intermediate state
Zimmermann N, Noga A, Obbineni JM, Ishikawa T
EMBO J (2023) 42 pp. e112466-e112466 [ Pubmed: 37051721 DOI: doi:10.15252/embj.2022112466 ]
In situ outer dynein arm from Chlamydomonas reinhardtii in an intermediate
Zimmermann N, Noga A, Obbineni JM, Ishikawa T
EMBO J (2023) 42 pp. e112466-e112466 [ Pubmed: 37051721 DOI: doi:10.15252/embj.2022112466 ]
Cilia from MOT7 deletion mutant of Chlamydomonas
Kutomi O, Yamamoto R, Hirose K, Mizuno K, Nakagiri Y, Imai H, Noga A, Obbineni JM, Zimmermann N, Nakajima M, Shibata D, Shibata M, Shiba K, Kita M, Kigoshi H, Tanaka Y, Yamasaki Y, Asahina Y, Song C, Nomura M, Nomura M, Nakajima A, Nakachi M, Yamada L, Nakazawa S, Sawada H, Murata K, Mitsuoka K, Ishikawa T, Wakabayashi KI, Kon T, Inaba K
Sci Adv (2021) 7 [ Pubmed: 33637535 DOI: doi:10.1126/sciadv.abf3621 ]
Chlamydomonas cilia with MOT7-BCCP labeled
Kutomi O, Yamamoto R, Hirose K, Mizuno K, Nakagiri Y, Imai H, Noga A, Obbineni JM, Zimmermann N, Nakajima M, Shibata D, Shibata M, Shiba K, Kita M, Kigoshi H, Tanaka Y, Yamasaki Y, Asahina Y, Song C, Nomura M, Nomura M, Nakajima A, Nakachi M, Yamada L, Nakazawa S, Sawada H, Murata K, Mitsuoka K, Ishikawa T, Wakabayashi KI, Kon T, Inaba K
Sci Adv (2021) 7 [ Pubmed: 33637535 DOI: doi:10.1126/sciadv.abf3621 ]
Microtubule doublet structure from WT Chlamydomonas as a control for MOT7 mutants
Kutomi O, Yamamoto R, Hirose K, Mizuno K, Nakagiri Y, Imai H, Noga A, Obbineni JM, Zimmermann N, Nakajima M, Shibata D, Shibata M, Shiba K, Kita M, Kigoshi H, Tanaka Y, Yamasaki Y, Asahina Y, Song C, Nomura M, Nomura M, Nakajima A, Nakachi M, Yamada L, Nakazawa S, Sawada H, Murata K, Mitsuoka K, Ishikawa T, Wakabayashi KI, Kon T, Inaba K
Sci Adv (2021) 7 [ Pubmed: 33637535 DOI: doi:10.1126/sciadv.abf3621 ]
Radial spoke head structure with 2-fold symmetization
Poghosyan E, Iacovache I, Faltova L, Leitner A, Yang P, Diener DR, Aebersold R, Zuber B, Ishikawa T
J Cell Sci (2020) 133 [ Pubmed: 32694165 DOI: doi:10.1242/jcs.245233 ]
- Radial spoke of cilia (1 MDa, Complex from Chlamydomonas reinhardtii)
Radial spoke from cilia (before symmetrization)
Poghosyan E, Iacovache I, Faltova L, Leitner A, Yang P, Diener DR, Aebersold R, Zuber B, Ishikawa T
J Cell Sci (2020) 133 [ DOI: doi:10.1242/jcs.245233 Pubmed: 32694165 ]
- Radial spoke of cilia (1 MDa, Complex from Chlamydomonas reinhardtii)
Cryo-electron tomography averaged map of microtubule doublet from p23 mutant Chlamydomonas axoneme
Yamamoto R, Obbineni JM, Alford LM, Ide T, Owa M, Hwang J, Kon T, Inaba K, James N, King SM, Ishikawa T, Sale WS, Dutcher SK
PLoS Genet (2017) 13 pp. e1006996-e1006996 [ DOI: doi:10.1371/journal.pgen.1006996 Pubmed: 28892495 ]