Cryo-EM map of the Chlamydomonas C* complex from Cdc5L-Flag dataset
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8xi2
Q-score: 0.381
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
- Rna (173-mer) (55 kDa, RNA from Chlamydomonas reinhardtii)
- Ppiase cyclophilin-type domain-containing protein (61 kDa, Protein from Chlamydomonas reinhardtii)
- Crooked neck protein (96 kDa, Protein from Chlamydomonas reinhardtii)
- U5 snrna (35 kDa, RNA from Chlamydomonas reinhardtii)
- Peptidyl-prolyl cis-trans isomerase (17 kDa, Protein from Chlamydomonas reinhardtii)
- U2 snrna (61 kDa, RNA from Chlamydomonas reinhardtii)
- Intron-binding protein aquarius (201 kDa, Protein from Chlamydomonas reinhardtii)
- Mi domain-containing protein (102 kDa, Protein from Chlamydomonas reinhardtii)
- Cwf21 domain-containing protein (80 kDa, Protein from Chlamydomonas reinhardtii)
- Elongation factor tu, chloroplastic (109 kDa, Protein from Chlamydomonas reinhardtii)
- U6 snrna (32 kDa, RNA from Chlamydomonas reinhardtii)
- Pre-mrna-processing factor 19 (54 kDa, Protein from Chlamydomonas reinhardtii)
- Sm protein f (9 kDa, Protein from Chlamydomonas reinhardtii)
- Rna (5'-r(p*cp*cp*gp*ap*ap*cp*g)-3') (2 kDa, RNA from Chlamydomonas reinhardtii)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Chlamydomonas reinhardtii)
- Mpn domain-containing protein (278 kDa, Protein from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein sm d1 (12 kDa, Protein from Chlamydomonas reinhardtii)
- U5-40k (39 kDa, Protein from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein sm d2 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Prp17 (63 kDa, Protein from Chlamydomonas reinhardtii)
- Chlamydomonas c* complex (Complex from Chlamydomonas reinhardtii)
- Plrg1 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Syf1 (104 kDa, Protein from Chlamydomonas reinhardtii)
- Rbm22 (44 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Chlamydomonas reinhardtii)
- Sm domain-containing protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ski-interacting protein skip snw domain-containing protein (73 kDa, Protein from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- Small nuclear ribonucleoprotein sm d3 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Cwf15/cwc15 cell cycle control protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- G10 protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- Cdc5l (91 kDa, Protein from Chlamydomonas reinhardtii)
- Pre-mrna-splicing factor spf27 (32 kDa, Protein from Chlamydomonas reinhardtii)
Local EM map of Prp19 subcomplex of Chlamydomonas C* complex from Cdc5L-Flag dataset
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
Local EM map of N-ter of Prp17 of Chlamydomonas C* complex from Cdc5L-Flag dataset
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
Local EM map of U5 snRNP of Chlamydomonas C* complex from Cdc5L-Flag dataset
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
Overall EM map of the Chlamydomonas C* complex from Prp19-Flag dataset
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
Local EM map of Prp19 subcomplex of Chlamydomonas C* complex from Prp19-Flag dataset
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
Local EM map of N-ter of Prp17 of Chlamydomonas C* from Prp19-Flag dataset
EMBO J (2024) [ Pubmed: 39415054 DOI: doi:10.1038/s44318-024-00274-3 ]
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8xqw
Q-score: 0.502
Liang K, Zhan X, Li Y, Yang Y, Xie Y, Jin Z, Xu X, Zhang W, Lu Y, Zhang S, Zou Y, Feng S, Wu J, Yan Z
Cell (2024) 187 pp. 5638-5650.e18 [ Pubmed: 39197449 DOI: doi:10.1016/j.cell.2024.08.002 ]
- Pcya (61 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam35 (34 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Crtam31 (31 kDa, Protein from Chlamydomonas reinhardtii)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Tic22 (40 kDa, Protein from Chlamydomonas reinhardtii)
- Ycf2 (342 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam39 (39 kDa, Protein from Chlamydomonas reinhardtii)
- Beta-sitosterol (416 Da, Ligand)
- Unk (13 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam34 (34 kDa, Protein from Chlamydomonas reinhardtii)
- Fhl3 (120 kDa, Protein from Chlamydomonas reinhardtii)
- Unk (7 kDa, Protein from Chlamydomonas reinhardtii)
- Fadl (70 kDa, Protein from Chlamydomonas reinhardtii)
- Ctap1 (107 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- The ycf2-ftshi motor complex from chlamydomonas (Complex from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Ctap6 (109 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam15 (15 kDa, Protein from Chlamydomonas reinhardtii)
- Acp (12 kDa, Protein from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- Ctap7 (71 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam29 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Crtam49 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Dnaj (50 kDa, Protein from Chlamydomonas reinhardtii)
- Fhl1 (128 kDa, Protein from Chlamydomonas reinhardtii)
- Diacyl glycerol (625 Da, Ligand)
- Arhl (51 kDa, Protein from Chlamydomonas reinhardtii)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Cryo-EM structure of the Ycf2-FtsHi motor complex from chlamydomonas reinhardtii in apo state
Liang K, Zhan X, Li Y, Yang Y, Xie Y, Jin Z, Xu X, Zhang W, Lu Y, Zhang S, Zou Y, Feng S, Wu J, Yan Z
Cell (2024) 187 pp. 5638-5650.e18 [ Pubmed: 39197449 DOI: doi:10.1016/j.cell.2024.08.002 ]
- Pcya (61 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam35 (34 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Crtam31 (31 kDa, Protein from Chlamydomonas reinhardtii)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Tic22 (40 kDa, Protein from Chlamydomonas reinhardtii)
- Ycf2 (342 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam39 (39 kDa, Protein from Chlamydomonas reinhardtii)
- Beta-sitosterol (416 Da, Ligand)
- Unk (13 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam34 (34 kDa, Protein from Chlamydomonas reinhardtii)
- Fhl3 (120 kDa, Protein from Chlamydomonas reinhardtii)
- Unk (7 kDa, Protein from Chlamydomonas reinhardtii)
- Fadl (70 kDa, Protein from Chlamydomonas reinhardtii)
- Ctap1 (107 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- The ycf2-ftshi motor complex from chlamydomonas (Complex from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Ctap6 (109 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam15 (15 kDa, Protein from Chlamydomonas reinhardtii)
- Acp (12 kDa, Protein from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- Ctap7 (71 kDa, Protein from Chlamydomonas reinhardtii)
- Crtam29 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Crtam49 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Dnaj (50 kDa, Protein from Chlamydomonas reinhardtii)
- Fhl1 (128 kDa, Protein from Chlamydomonas reinhardtii)
- Diacyl glycerol (625 Da, Ligand)
- Arhl (51 kDa, Protein from Chlamydomonas reinhardtii)