Bry-LHCII homotrimer of Bryopsis corticulans
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 8hlv
Q-score: 0.608
Li Z, Zhou C, Zhao S, Zhang J, Liu X, Sang M, Qin X, Yang Y, Han G, Kuang T, Shen JR, Wang W
Structure (2023) 31 pp. 1247- [ DOI: doi:10.1016/j.str.2023.08.001 Pubmed: 37633266 ]
- Siphonein (781 Da, Ligand)
- (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol (600 Da, Ligand)
- Siphonaxanthin (600 Da, Ligand)
- Chlorophyll b (907 Da, Ligand)
- Bryopsis corticulans chlorophyll a/b-type light-harvesting complex ii homotrimer (Complex from Bryopsis corticulans)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Siphonaxanthin chlorophyll a/b binding light-harvesting complex ii, bry-lhcb1 (26 kDa, Protein from Bryopsis corticulans)
Bry-LHCII heterotrimer of Bryopsis corticulans
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 8hpd
Q-score: 0.571
Li Z, Zhou C, Zhao S, Zhang J, Liu X, Sang M, Qin X, Yang Y, Han G, Kuang T, Shen JR, Wang W
Structure (2023) 31 pp. 1247-1258.e3 [ DOI: doi:10.1016/j.str.2023.08.001 Pubmed: 37633266 ]
- Siphonaxanthin chlorophyll a/b binding light-harvesting complex ii, bry-lhcb2 (27 kDa, Protein from Bryopsis corticulans)
- Siphonein (781 Da, Ligand)
- (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol (600 Da, Ligand)
- Siphonaxanthin (600 Da, Ligand)
- Siphonaxanthin chlorophyll a/b binding light-harvesting complex ii, bry-lhcb1 (26 kDa, Protein from Bryopsis corticulans)
- Chlorophyll b (907 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Siphonaxanthin chlorophyll a/b binding light-harvesting complex ii, bry-lhcb3 (27 kDa, Protein from Bryopsis corticulans)
- Bryopsis corticulans chlorophyll a/b-type light-harvesting complex ii heterotrimer (Complex from Bryopsis corticulans)
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 6igz
Q-score: 0.475
Qin X, Pi X, Wang W, Han G, Zhu L, Liu M, Cheng L, Shen JR, Kuang T, Sui SF
Nat Plants (2019) 5 pp. 263-272 [ DOI: doi:10.1038/s41477-019-0379-y Pubmed: 30850820 ]
- Psad (21 kDa, Protein from Bryopsis corticulans)
- Lhca-g (29 kDa, Protein from Bryopsis corticulans)
- Iron/sulfur cluster (351 Da, Ligand)
- Psag (18 kDa, Protein from Bryopsis corticulans)
- Phylloquinone (450 Da, Ligand)
- Lhca-h (28 kDa, Protein from Bryopsis corticulans)
- Psak (12 kDa, Protein from Bryopsis corticulans)
- Lhca-j (26 kDa, Protein from Bryopsis corticulans)
- Lhca-i (24 kDa, Protein from Bryopsis corticulans)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Bryopsis corticulans)
- Psae (10 kDa, Protein from Bryopsis corticulans)
- Psaj (4 kDa, Protein from Bryopsis corticulans)
- Psi-lhci (Complex from Bryopsis corticulans)
- Psaa (83 kDa, Protein from Bryopsis corticulans)
- Chlorophyll b (907 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Lhca-b (26 kDa, Protein from Bryopsis corticulans)
- Psah (14 kDa, Protein from Bryopsis corticulans)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Psab (82 kDa, Protein from Bryopsis corticulans)
- Psaf (25 kDa, Protein from Bryopsis corticulans)
- Lhca-c (27 kDa, Protein from Bryopsis corticulans)
- Psac (8 kDa, Protein from Bryopsis corticulans)
- Psai (3 kDa, Protein from Bryopsis corticulans)
- Lhca-a (24 kDa, Protein from Bryopsis corticulans)
- Psal (21 kDa, Protein from Bryopsis corticulans)
- Chlorophyll a (893 Da, Ligand)
- Heptyl 1-thiohexopyranoside (294 Da, Ligand)
- (6'r,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene (536 Da, Ligand)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Lhca-d (30 kDa, Protein from Bryopsis corticulans)