Pr conformer of Zea mays phytochrome A1 - ZmphyA1-Pr
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8isk
Q-score: 0.415
Zhang Y, Lin X, Ma C, Zhao J, Shang X, Wang Z, Xu B, Gao N, Deng XW, Wang J
Cell Res (2023) 33 pp. 806-809 [ DOI: doi:10.1038/s41422-023-00858-4 Pubmed: 37491602 ]
- Phytochrome (124 kDa, Protein from Zea mays)
- Zea mays phytochrome a1 (zmphya1-pr) (Complex from Arabidopsis thaliana)
- 3-[5-[[(3~{r},4~{r})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{h}-pyrrol-2-yl]methyl]-4-methyl-1~{h}-pyrrol-3-yl]propanoic acid (586 Da, Ligand)
CryoEM structure of apo form ZmRDR2 at 3.4 Angstroms resolution
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7w84
Q-score: 0.438
Du X, Yang Z, Ariza AJF, Wang Q, Xie G, Li S, Du J
Plant Cell (2022) 34 pp. 2140-2149 [ DOI: doi:10.1093/plcell/koac067 Pubmed: 35188193 ]
- Rna-dependent rna polymerase (126 kDa, Protein from Zea mays)
- Rna-dependent rna polymerase 2 in apo form (Cellular component from Zea mays)
CryoEM structure of open form ZmRDR2 at 3.5 Angstroms resolution
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7w88
Q-score: 0.422
Du X, Yang Z, Ariza AJF, Wang Q, Xie G, Li S, Du J
Plant Cell (2022) 34 pp. 2140-2149 [ DOI: doi:10.1093/plcell/koac067 Pubmed: 35188193 ]
- Rna-dependent rna polymerase (126 kDa, Protein from Zea mays)
- Rna-dependent rna polymerase 2 in open form (Cellular component from Zea mays)
Nat Plants (2021) 7 pp. 514-523 [ DOI: doi:10.1038/s41477-021-00896-z Pubmed: 33875833 ]
Nat Plants (2021) 7 pp. 514-523 [ DOI: doi:10.1038/s41477-021-00896-z Pubmed: 33875833 ]
Nat Plants (2021) 7 pp. 514-523 [ DOI: doi:10.1038/s41477-021-00896-z Pubmed: 33875833 ]
Nat Plants (2021) 7 pp. 514-523 [ DOI: doi:10.1038/s41477-021-00896-z Pubmed: 33875833 ]
Structure of cryptochrome in active conformation
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6lz3
Q-score: 0.476
Shao K, Zhang X, Li X, Hao Y, Huang X, Ma M, Zhang M, Yu F, Liu H, Zhang P
Nat Struct Mol Biol (2020) 27 pp. 480-488 [ DOI: doi:10.1038/s41594-020-0420-x Pubmed: 32398825 ]
- Flavin-adenine dinucleotide (785 Da, Ligand)
- Cryptochrome2 (77 kDa, Protein from Zea mays)
- Tetrameric complex of zmcry1c (Complex from Zea mays)
Cryo-EM structure of the plant actin filaments from Zea mays pollen
Resolution: 3.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 6iug
Q-score: 0.393
Ren Z, Zhang Y, Zhang Y, He Y, Du P, Wang Z, Sun F, Ren H
Plant Cell (2019) 31 pp. 2855-2867 [ DOI: doi:10.1105/tpc.18.00973 Pubmed: 31628168 ]
- The actin filament from zea mays pollen (15 MDa, Complex from Zea mays)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Pollen f-actin (41 kDa, Protein from Zea mays)