Cryo-EM structure of the Carboxyltransferase Domain of Trichoplusia ni Acetyl-Coenzyme A Carboxylase
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 9cv6
Q-score: 0.519
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Resolution: 2.42 Å
EM Method: Single-particle
Fitted PDBs: 8p7b
Q-score: 0.615
Throll P, G Dolce L, Rico-Lastres P, Arnold K, Tengo L, Basu S, Kaiser S, Schneider R, Kowalinski E
Nat Struct Mol Biol (2024) 31 pp. 1614-1624 [ DOI: doi:10.1038/s41594-024-01341-3 Pubmed: 38918637 ]
- Serine--trna ligase, cytoplasmic (58 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Serine trna (27 kDa, RNA from Trichoplusia ni)
- Trna n(3)-methylcytidine methyltransferase mettl6 (33 kDa, Protein from Homo sapiens)
- Serine trna (27 kDa, RNA from Trichoplusia ni)
- Magnesium ion (24 Da, Ligand)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Mettl6 trna serrs complex in a 1:2:2 stoichiometry (Complex from Homo sapiens)
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8p7c
Q-score: 0.268
Throll P, G Dolce L, Rico-Lastres P, Arnold K, Tengo L, Basu S, Kaiser S, Schneider R, Kowalinski E
Nat Struct Mol Biol (2024) 31 pp. 1614-1624 [ DOI: doi:10.1038/s41594-024-01341-3 Pubmed: 38918637 ]
- Mettl6 trna serrs complex in a 2:2:2 stoichiometry (Complex from Homo sapiens)
- Serine--trna ligase, cytoplasmic (58 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Serine trna (27 kDa, RNA from Trichoplusia ni)
- Trna n(3)-methylcytidine methyltransferase mettl6 (33 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8p7d
Q-score: 0.271
Throll P, G Dolce L, Rico-Lastres P, Arnold K, Tengo L, Basu S, Kaiser S, Schneider R, Kowalinski E
Nat Struct Mol Biol (2024) 31 pp. 1614-1624 [ DOI: doi:10.1038/s41594-024-01341-3 Pubmed: 38918637 ]
- Serine--trna ligase, cytoplasmic (58 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Serine trna (27 kDa, RNA from Trichoplusia ni)
- Trna n(3)-methylcytidine methyltransferase mettl6 (33 kDa, Protein from Homo sapiens)
- Mettl6 trna serrs complex in a 1:1:2 stoichiometry (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
Throll P, G Dolce L, Rico-Lastres P, Arnold K, Tengo L, Basu S, Kaiser S, Schneider R, Kowalinski E
Nat Struct Mol Biol (2024) 31 pp. 1614-1624 [ DOI: doi:10.1038/s41594-024-01341-3 Pubmed: 38918637 ]
- Serrs homodimer (Protein from Homo sapiens)
- Mettl6 trna serrs complex in a 1:2:2 stoichiometry (Complex)
- Serine trna (RNA from Trichoplusia ni)
- Sers (Complex from Homo sapiens)
- Trna (Complex from Trichoplusia ni)
Serine tRNA from Trichoplusia ni
Throll P, G Dolce L, Rico-Lastres P, Arnold K, Tengo L, Basu S, Kaiser S, Schneider R, Kowalinski E
Nat Struct Mol Biol (2024) 31 pp. 1614-1624 [ DOI: doi:10.1038/s41594-024-01341-3 Pubmed: 38918637 ]
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8va2
Q-score: 0.36
Aher A, Urnavicius L, Xue A, Neselu K, Kapoor TM
Nat Struct Mol Biol (2024) 31 pp. 1124-1133 [ Pubmed: 38609661 DOI: doi:10.1038/s41594-024-01264-z ]
- Gamma-tubulin and alpha-tubulin (Complex from Trichoplusia ni)
- Tubulin gamma-1 chain (50 kDa, Protein from Homo sapiens)
- Tubulin alpha-1b chain (51 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8u1l
Q-score: 0.282
Finci LI, Chakrabarti M, Gulten G, Finney J, Grose C, Fox T, Yang R, Nissley DV, McCormick F, Esposito D, Balius TE, Simanshu DK
Commun Biol (2024) 7 pp. 260-260 [ Pubmed: 38431713 DOI: doi:10.1038/s42003-024-05959-3 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Heat shock protein 90 (Complex from Trichoplusia ni)
- Complex of raf1-hsp90-cdc37 (Complex)
- Hsp90 co-chaperone cdc37, n-terminally processed (44 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Heat shock protein 83 (83 kDa, Protein from Trichoplusia ni)
- Raf1 & hsp90 co-chaperone cdc37 (Complex from Homo sapiens)
- Raf proto-oncogene serine/threonine-protein kinase (74 kDa, Protein from Homo sapiens)
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8u1m
Q-score: 0.261
Finci LI, Chakrabarti M, Gulten G, Finney J, Grose C, Fox T, Yang R, Nissley DV, McCormick F, Esposito D, Balius TE, Simanshu DK
Commun Biol (2024) 7 pp. 260-260 [ Pubmed: 38431713 DOI: doi:10.1038/s42003-024-05959-3 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Heat shock protein 90 (166 kDa, Complex from Trichoplusia ni)
- Magnesium ion (24 Da, Ligand)
- Heat shock protein 83 (83 kDa, Protein from Trichoplusia ni)
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8u1n
Q-score: 0.333
Finci LI, Chakrabarti M, Gulten G, Finney J, Grose C, Fox T, Yang R, Nissley DV, McCormick F, Esposito D, Balius TE, Simanshu DK
Commun Biol (2024) 7 pp. 260-260 [ Pubmed: 38431713 DOI: doi:10.1038/s42003-024-05959-3 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Heat shock protein 90 (166 kDa, Complex from Trichoplusia ni)
- Magnesium ion (24 Da, Ligand)
- Heat shock protein 83 (83 kDa, Protein from Trichoplusia ni)