Cryo-EM structure of Kip3 (AMPPNP) bound to Taxol-Stabilized Microtubules
Resolution: 3.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 7rs5
Q-score: 0.235
Arellano-Santoyo H, Hernandez-Lopez RA, Stokasimov E, Wang RYR, Pellman D, Leschziner AE
bioRxiv (2021) [ DOI: doi:10.1101/2021.10.12.464151 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Yeast kinesin-8/ kip3 (39 kDa, Protein from Saccharomyces cerevisiae)
- Yeast kinesin-8/ kip3 (Complex from Saccharomyces cerevisiae)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Cryo-em structure of kip3 (amppnp) bound to taxol-stabilized microtubules (Complex)
- Taxol (853 Da, Ligand)
- Taxol-stabilized microtubules (Complex from Sus scrofa)
- Tubulin alpha-1a chain (50 kDa, Protein from Sus scrofa)
Cryo-EM structure of Kip3 (AMPPNP) bound to GMPCPP-Stabilized Microtubules
Resolution: 4.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 7rs6
Q-score: 0.141
Arellano-Santoyo H, Hernandez-Lopez RA, Stokasimov E, Wang RY-R, Pellman D, Lesczhiner AE
bioRxiv (2024) [ DOI: doi:10.1101/2021.10.12.464151 ]
- Kinesin-8/ kip3 (39 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Yeast kinesin-8/ kip3 (Complex from Saccharomyces cerevisiae)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Cryo-em structure of kip3 (amppnp) bound to gmpcpp-stabilized microtubules (Complex)
- Gmpcpp-stabilized microtubules (Complex from Sus scrofa)
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 6o2r
Q-score: 0.461
Eshun-Wilson L, Zhang R, Portran D, Nachury MV, Toso DB, Lohr T, Vendruscolo M, Bonomi M, Fraser JS, Nogales E
PNAS (2019) 116 pp. 10366-10371 [ DOI: doi:10.1073/pnas.1900441116 Pubmed: 31072936 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Deacetylated microtubule (Tissue from Sus scrofa)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
Resolution: 4.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 6o2s
Q-score: 0.275
Eshun-Wilson L, Zhang R, Portran D, Nachury MV, Toso DB, Lohr T, Vendruscolo M, Bonomi M, Fraser JS, Nogales E
PNAS (2019) 116 pp. 10366-10371 [ DOI: doi:10.1073/pnas.1900441116 Pubmed: 31072936 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Deacetylated microtubule (Tissue from Sus scrofa)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
Resolution: 4.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 6o2t
Q-score: 0.252
Eshun-Wilson L, Zhang R, Portran D, Nachury MV, Toso DB, Lohr T, Vendruscolo M, Bonomi M, Fraser JS, Nogales E
PNAS (2019) 116 pp. 10366-10371 [ DOI: doi:10.1073/pnas.1900441116 Pubmed: 31072936 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Acetylated microtubule (Tissue from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
Resolution: 3.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 6cvj
Q-score: 0.486
Kellogg EH, Hejab NMA, Poepsel S, Downing KH, DiMaio F, Nogales E
Science (2018) 360 pp. 1242-1246 [ Pubmed: 29748322 DOI: doi:10.1126/science.aat1780 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Microtubule-associated protein tau (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta chain (Complex from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Ternary complex of alpha-beta tubulin with synthetic (r1x4) tau (Complex)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (Complex from Sus scrofa)
- Microtubule-associated protein tau (21 kDa, Protein from Homo sapiens)
Cryo-EM reconstruction of microtubule-bound synthetic (R2x4) tau
Resolution: 3.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 6cvn
Q-score: 0.377
Kellogg EH, Hejab NMA, Poepsel S, Downing KH, DiMaio F, Nogales E
Science (2018) 360 pp. 1242-1246 [ Pubmed: 29748322 DOI: doi:10.1126/science.aat1780 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Microtubule-associated protein tau (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta chain (Complex from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Microtubule-associated protein tau (21 kDa, Protein from Homo sapiens)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (Complex from Sus scrofa)
- Ternary complex of alpha-beta tubulin with synthetic (r2x4) tau (Complex)