Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7bg6
Q-score: 0.631
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Water (18 Da, Ligand)
- Genome polyprotein (30 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (7 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (26 kDa, Protein from Human rhinovirus 14)
- Rhinovirus b14 (8 MDa, Virus from Rhinovirus B14)
- Rna-octamer (5'-r(p*up*gp*up*up*up*up*up*a)-3') (2 kDa, RNA from Rhinovirus B14)
HRV14 in complex with its receptor ICAM-1
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 7bg7
Q-score: 0.696
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Genome polyprotein (7 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (26 kDa, Protein from Human rhinovirus 14)
- Intercellular adhesion molecule 1 (49 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Human rhinovirus 14 (10 MDa, Virus)
- Rhinovirus (Complex from Human rhinovirus 14)
- Intercellular adhesion molecule 1 (Complex from Homo sapiens)
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (32 kDa, Protein from Human rhinovirus 14)
Rhinovirus-14 ICAM-1 activated particle at pH 6.2
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7nul
Q-score: 0.431
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Rhinovirus b14 (7 MDa, Virus from Rhinovirus B14)
- P1 (25 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (32 kDa, Protein from Human rhinovirus 14)
Rhinovirus-14 ICAM-1 empty particle at pH 6.2
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7num
Q-score: 0.487
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Rhinovirus b14 (7 MDa, Virus from Rhinovirus B14)
- P1 (25 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (32 kDa, Protein from Human rhinovirus 14)
Rhinovirus 14 ICAM-1 virion-like particle at pH 6.2
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7nun
Q-score: 0.472
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Octanucleotide (2 kDa, RNA from Rhinovirus B14)
- Genome polyprotein (26 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (32 kDa, Protein from Human rhinovirus 14)
- Rhinovirus b14 (7 MDa, Virus from Rhinovirus B14)
- Genome polyprotein (7 kDa, Protein from Human rhinovirus 14)
Rhinovirus 14 empty particle at pH 6.2
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7nuo
Q-score: 0.395
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Rhinovirus b14 (7 MDa, Virus from Rhinovirus B14)
- P1 (25 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (32 kDa, Protein from Human rhinovirus 14)
RV14 ICAM-1 pH 6.2 open particle
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Rhinovirus b14 (7 MDa, Virus from Rhinovirus B14)
- Capsid protein vp1 (Protein from Rhinovirus B14)
- Capsid protein vp3 (Protein from Rhinovirus B14)
- Capsid protein vp2 (Protein from Rhinovirus B14)
Rhinovirus 14 virion-like at pH 6.2
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7nuq
Q-score: 0.509
Hrebik D, Fuzik T, Gondova M, Smerdova L, Adamopoulos A, Sedo O, Zdrahal Z, Plevka P
PNAS (2021) 118 [ Pubmed: 33947819 DOI: doi:10.1073/pnas.2024251118 ]
- Genome polyprotein (7 kDa, Protein from Human rhinovirus 14)
- Octanucleotide (2 kDa, RNA from Rhinovirus B14)
- Genome polyprotein (26 kDa, Protein from Human rhinovirus 14)
- Rhinovirus b14 (7 MDa, Virus from Rhinovirus B14)
- Genome polyprotein (28 kDa, Protein from Human rhinovirus 14)
- Genome polyprotein (32 kDa, Protein from Human rhinovirus 14)