Corynebacterium glutamicum PS2 S-layer
Isbilir B, Yeates A, Alva V, Bharat T
To Be Published
- Corynebacterium glutamicum ps2 s-layer (53 kDa, Complex from Corynebacterium glutamicum ATCC 13058)
- Ps2 (54 kDa, Protein from Corynebacterium glutamicum)
Ex vivo cannulae fiber structure of Pyrodictium abyssi
Resolution: 2.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 9h8b
Q-score: 0.647
Sleutel M, Sonani RR, Miller JG, Wang F, Socorro AG, Chen Y, Martin R, Demeler B, Rudolph MJ, Alva V, Remaut H, Egelman EH, Conticello VP
bioRxiv (2024) [ DOI: doi:10.1101/2024.12.30.630787 Pubmed: 39803462 ]
- Canx (18 kDa, Protein from Pyrodictium abyssi DSM 6158)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Ex vivo canx fibers from pyrodictium abyssi (Complex from Pyrodictium abyssi DSM 6158)
In situ structure of the Nitrosopumilus maritimus S-layer - Six-fold symmetry (C6)
Resolution: 3.4 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8c8o
Q-score: 0.434
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
In situ structure of the Nitrosopumilus maritimus S-layer - Composite map between C2 and C6
Resolution: 3.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8c8r
Q-score: 0.438
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
In vitro structure of the Nitrosopumilus maritimus S-layer - Six-fold symmetry (C6)
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8c8k
Q-score: 0.543
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
In vitro structure of the Nitrosopumilus maritimus S-layer - Two-fold symmetry (C2)
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 8c8l
Q-score: 0.595
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8c8m
Q-score: 0.556
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
In vitro Nitrosopumilus maritimus S-layer with NH4Cl
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
In situ structure of the Nitrosopumilus maritimus S-layer - Two-fold symmetry (C2)
Resolution: 3.4 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8c8n
Q-score: 0.489
von Kugelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Lowe J, Alva V, Stansfeld PJ, Bharat TAM
Nature (2024) 630 pp. 230-236 [ Pubmed: 38811725 DOI: doi:10.1038/s41586-024-07462-5 ]
Deinococcus radidurans HPI S-layer
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 8cka
Q-score: 0.582
von Kugelgen A, van Dorst S, Yamashita K, Sexton DL, Tocheva EI, Murshudov G, Alva V, Bharat TAM
PNAS (2023) 120 pp. e2215808120-e2215808120 [ Pubmed: 37043530 DOI: doi:10.1073/pnas.2215808120 ]
- Structure of hexagonally packed intermediate-layer (hpi) protein (Cellular component from Deinococcus radiodurans)
- Hexagonally packed intermediate-layer surface protein (99 kDa, Protein from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422))