Electron Microscopy Data Bank

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Subtomogram average of immature PhiKZ Major Capsid Protein from tubular arrays

Release date: May 8, 2024
Resolution: 13.0 Å
EM Method: Subtomogram averaging

Birkholz EA, Morgan CJ, Laughlin TG, Lau RK, Prichard A, Rangarajan S, Meza GN, Lee J, Armbruster E, Suslov S, Pogliano K, Meyer JR, Villa E, Corbett KD, Pogliano J

Science (2024) 385 pp. 105-112 [ Pubmed: 38963841 DOI: doi:10.1126/science.adl1356 ]

Sample:

EMPIAR-10788

Release date: Oct. 7, 2022
Dataset size: 9.6 GB
Experiment type: EMDB

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 [ Pubmed: 35984891 DOI: 10.1126/sciadv.abo3153 ]

Image sets:

Prealigned tilt series of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs)

EMD-24599

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Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 2M,N, Fig 3J, and Supp. Movie 1 of the manuscript Marcink et al., 2021).

Release date: Aug. 31, 2022
EM Method: Tomography

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-24600

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Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 2K,L, and Supp. Movie 2 of the manuscript Marcink et. al 2021,).

Release date: Aug. 31, 2022
EM Method: Tomography

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-24601

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Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 4B-E and Supp. Movie 3 of manuscript Marcink et al., 2021).

Release date: Aug. 31, 2022
EM Method: Tomography

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-24602

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Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig 2E-G of the manuscript Marcink et al., 2021).

Release date: Aug. 31, 2022
EM Method: Tomography

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-24603

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Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 3D,E of the manuscript Marcink et al., 2021).

Release date: Aug. 31, 2022
EM Method: Tomography

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-24604

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Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 4H-J of the manuscript Marcink et al., 2021)

Release date: Aug. 31, 2022
EM Method: Tomography

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-26679

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Subtomogram averaged map of hACE2 dimers on the surface of extracellular vesicles

Release date: Aug. 31, 2022
Resolution: 19.0 Å
EM Method: Subtomogram averaging

Marcink TC, Kicmal T, Armbruster E, Zhang Z, Zipursky G, Golub KL, Idris M, Khao J, Drew-Bear J, McGill G, Gallagher T, Porotto M, des Georges A, Moscona A

Sci Adv (2022) 8 pp. eabo3153-eabo3153 [ DOI: doi:10.1126/sciadv.abo3153 Pubmed: 35984891 ]

Sample:

EMD-25183

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P. chlororaphis 70S ribosome in situ subtomogram average

Release date: July 27, 2022
Resolution: 10.2 Å
EM Method: Subtomogram averaging

Laughlin TG, Deep A, Prichard AM, Seitz C, Gu Y, Enustun E, Suslov S, Khanna K, Birkholz EA, Armbruster E, McCammon JA, Amaro RE, Pogliano J, Corbett KD, Villa E

Nature (2022) 608 pp. 429-435 [ DOI: doi:10.1038/s41586-022-05013-4 Pubmed: 35922510 ]

Sample:

P. chlororaphis 70s ribosome (2 MDa, Complex from Pseudomonas chlororaphis)

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