Apo Hantaan virus polymerase core
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 8c4s
Q-score: 0.508
Durieux Trouilleton Q, Barata-Garcia S, Arragain B, Reguera J, Malet H
Nat Commun (2023) 14 pp. 2954-2954 [ Pubmed: 37221161 DOI: doi:10.1038/s41467-023-38555-w ]
- Rna-directed rna polymerase l (249 kDa, Protein from Hantaan virus 76-118)
- Apo hantaan virus polymerase core (246 kDa, Complex from Hantaan virus 76-118)
Hantaan virus polymerase bound to its 5' viral RNA
Resolution: 3.23 Å
EM Method: Single-particle
Fitted PDBs: 8c4t
Q-score: 0.532
Durieux Trouilleton Q, Barata-Garcia S, Arragain B, Reguera J, Malet H
Nat Commun (2023) 14 pp. 2954-2954 [ Pubmed: 37221161 DOI: doi:10.1038/s41467-023-38555-w ]
- Rna-directed rna polymerase l (249 kDa, Protein from Hantaan virus 76-118)
- Rna (5'-r(p*up*ap*gp*up*ap*gp*up*ap*gp*ap*cp*a)-3') (6 kDa, RNA from Hantaan virus 76-118)
- Hantaan virus polymerase bound to the 5' viral rna promoter (246 kDa, Complex from Hantaan virus 76-118)
- Magnesium ion (24 Da, Ligand)
Hantaan virus polymerase in replication pre-initiation state
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 8c4u
Q-score: 0.508
Durieux Trouilleton Q, Barata-Garcia S, Arragain B, Reguera J, Malet H
Nat Commun (2023) 14 pp. 2954-2954 [ Pubmed: 37221161 DOI: doi:10.1038/s41467-023-38555-w ]
- Rna-directed rna polymerase l (249 kDa, Protein from Hantaan virus 76-118)
- Rna (5'-r(p*up*up*up*up*gp*cp*gp*gp*ap*gp*up*ap*cp*up*ap*cp*up*a)-3') (7 kDa, RNA from Hantaan virus 76-118)
- Magnesium ion (24 Da, Ligand)
- Hantaan virus polymerase in replication pre-initiation state (246 kDa, Complex from Hantaan virus 76-118)
- Rna (5'-r(p*up*ap*gp*gp*ap*gp*up*ap*up*cp*cp*ap*cp*cp*gp*cp*ap*ap*gp*a)-3') (6 kDa, RNA from Hantaan virus 76-118)
Hantaan virus polymerase in replication elongation state
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8c4v
Q-score: 0.52
Durieux Trouilleton Q, Barata-Garcia S, Arragain B, Reguera J, Malet H
Nat Commun (2023) 14 pp. 2954-2954 [ Pubmed: 37221161 DOI: doi:10.1038/s41467-023-38555-w ]
- Rna (5'-r(p*ap*cp*up*ap*cp*up*a)-3') (7 kDa, RNA from Hantaan virus 76-118)
- Hantaan virus polymerase in replication elongation state (246 kDa, Complex from Hantaan virus 76-118)
- Rna-directed rna polymerase l (249 kDa, Protein from Hantaan virus 76-118)
- Rna (5'-r(p*ap*gp*gp*ap*gp*up*ap*up*cp*cp*ap*cp*cp*gp*cp*ap*ap*gp*a)-3') (6 kDa, RNA from Hantaan virus 76-118)
- Rna (5'-r(p*ap*gp*up*ap*gp*up*ap*gp*a)-3') (8 kDa, RNA from Hantaan virus 76-118)
- Magnesium ion (24 Da, Ligand)
Cryo-EM map of La Crosse virus polymerase at pre-initiation stage
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 6z6g
Q-score: 0.499
Arragain B, Effantin G, Gerlach P, Reguera J, Schoehn G, Cusack S, Malet H
Nat Commun (2020) 11 pp. 3590-3590 [ DOI: doi:10.1038/s41467-020-17349-4 Pubmed: 32681014 ]
- 5'vrna 9-16 (2 kDa, RNA from La Crosse orthobunyavirus)
- La crosse virus polymerase at pre-initiation stage (265 kDa, Complex)
- La crosse virus polymerase at pre-initiation stage (Complex from Bunyavirus La Crosse)
- Zinc ion (65 Da, Ligand)
- 3'vrna 1-16 (5 kDa, RNA from La Crosse orthobunyavirus)
- La crosse virus polymerase at pre-initiation stage (Complex from La Crosse orthobunyavirus)
- Magnesium ion (24 Da, Ligand)
- 5'vrna 1-10 (3 kDa, RNA from La Crosse orthobunyavirus)
- Rna-directed rna polymerase l (266 kDa, Protein from Bunyavirus La Crosse)
Masked cryo-EM map of La Crosse virus polymerase cap-binding domain and mid domain
Arragain B, Effantin G, Gerlach P, Reguera J, Schoehn G, Cusack S, Malet H
Nat Commun (2020) 11 pp. 3590-3590 [ DOI: doi:10.1038/s41467-020-17349-4 Pubmed: 32681014 ]
Masked cryo-EM map of La Crosse virus polymerase zinc-binding domain and mid domain
Arragain B, Effantin G, Gerlach P, Reguera J, Schoehn G, Cusack S, Malet H
Nat Commun (2020) 11 pp. 3590-3590 [ DOI: doi:10.1038/s41467-020-17349-4 Pubmed: 32681014 ]
La Crosse virus polymerase at elongation mimicking stage
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 6z8k
Q-score: 0.494
Arragain B, Effantin G, Gerlach P, Reguera J, Schoehn G, Cusack S, Malet H
Nat Commun (2020) 11 pp. 3590-3590 [ DOI: doi:10.1038/s41467-020-17349-4 Pubmed: 32681014 ]
- Zinc ion (65 Da, Ligand)
- La crosse virus polymerase at elongation stage (Complex from La Crosse orthobunyavirus)
- Rna-directed rna polymerase l (Complex from La Crosse orthobunyavirus)
- La crosse virus polymerase at elongation-mimicking stage (265 kDa, Complex)
- La crosse virus 5' vrna 1-10 (3 kDa, RNA from La Crosse orthobunyavirus)
- Rna-directed rna polymerase l (266 kDa, Protein from La Crosse orthobunyavirus)
- La crosse virus 5' vrna (9-16) (2 kDa, RNA from La Crosse orthobunyavirus)
- La crosse virus 3' vrna (1-16) (5 kDa, RNA from La Crosse orthobunyavirus)
- Magnesium ion (24 Da, Ligand)
Helical RNA-bound Hantaan virus nucleocapsid
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 6i2n
Q-score: 0.505
Arragain B, Reguera J, Desfosses A, Gutsche I, Schoehn G, Malet H
eLife (2019) 8 [ Pubmed: 30638449 DOI: doi:10.7554/eLife.43075 ]
- Rna (Complex from Spodoptera frugiperda)
- Rna (5'-r(p*up*up*u)-3') (873 Da, RNA from Spodoptera frugiperda)
- Hantaan virus nucleoprotein (Complex from Hantaan orthohantavirus)
- Rna-bound hantaan virus nucleocapsid (48 kDa, Complex)
- Nucleoprotein (48 kDa, Protein from Hantaan orthohantavirus)