Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 9ewv
Q-score: 0.447
Sokratian A, Zhou Y, Tatli M, Burbidge KJ, Xu E, Viverette E, Donzelli S, Duda AM, Yuan Y, Li H, Strader S, Patel N, Shiell L, Malankhanova T, Chen O, Mazzulli JR, Perera L, Stahlberg H, Borgnia M, Bartesaghi A, Lashuel HA, West AB
Sci Adv (2024) 10 pp. eadq3539-eadq3539 [ DOI: doi:10.1126/sciadv.adq3539 Pubmed: 39485845 ]
- Alpha-synuclein (14 kDa, Protein from Mus musculus)
- Mouse alpha-synuclein fibrils (10 MDa, Complex from Mus musculus)
Cryo-EM structure of the centromeric nucleosome with native alpha satellite DNA
Resolution: 3.395 Å
EM Method: Single-particle
Fitted PDBs: 6o1d
Q-score: 0.482
Zhou BR, Yadav KNS, Borgnia M, Hong J, Cao B, Olins AL, Olins DE, Bai Y, Zhang P
Nat Commun (2019) 10 pp. 2301-2301 [ DOI: doi:10.1038/s41467-019-10247-4 Pubmed: 31127102 ]
- Dna (145-mer) (44 kDa, DNA from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Histone h2a type 1-b/e (14 kDa, Protein from Homo sapiens)
- Dna (145-mer) (44 kDa, DNA from Homo sapiens)
- Cenp-a nucleosome with native alpha satellite dna sequence (Complex from Homo sapiens)
- Histone h3-like centromeric protein a (18 kDa, Protein from Homo sapiens)
- Histone h2b type 1-j (13 kDa, Protein from Homo sapiens)
Cryo-EM structure of nucleosome in complex with a single chain antibody fragment
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 6dzt
Q-score: 0.589
Zhou BR, Yadav KNS, Borgnia M, Hong J, Cao B, Olins AL, Olins DE, Bai Y, Zhang P
Nat Commun (2019) 10 pp. 2301-2301 [ DOI: doi:10.1038/s41467-019-10247-4 Pubmed: 31127102 ]
- Dna (147-mer) (45 kDa, DNA from Escherichia coli)
- Histone h2b (13 kDa, Protein from Drosophila melanogaster)
- Histone h2a (13 kDa, Protein from Drosophila melanogaster)
- Histone h3 (15 kDa, Protein from Drosophila melanogaster)
- Histone h4 (11 kDa, Protein from Drosophila melanogaster)
- Scfv (29 kDa, Protein from Mus musculus)
- Nucleosome-antibody complex (Complex from Drosophila melanogaster)
- Dna (147-mer) (45 kDa, DNA from Escherichia coli)
Cryo-EM structure of the CENP-A nucleosome (W601) in complex with a single chain antibody fragment
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 6e0c
Q-score: 0.59
Zhou BR, Yadav KNS, Borgnia M, Hong J, Cao B, Olins AL, Olins DE, Bai Y, Zhang P
Nat Commun (2019) 10 pp. 2301-2301 [ DOI: doi:10.1038/s41467-019-10247-4 Pubmed: 31127102 ]
- Cenp-a nucleosome (w601) complex (Complex from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Histone h2a type 1-b/e (14 kDa, Protein from Homo sapiens)
- Histone h3-like centromeric protein a (18 kDa, Protein from Homo sapiens)
- Scfv (29 kDa, Protein from Mus musculus)
- Dna (146-mer) (45 kDa, DNA from Escherichia coli)
- Dna (146-mer) (45 kDa, DNA from Escherichia coli)
- Histone h2b type 1-j (13 kDa, Protein from Homo sapiens)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 6e0p
Q-score: 0.57
Zhou BR, Yadav KNS, Borgnia M, Hong J, Cao B, Olins AL, Olins DE, Bai Y, Zhang P
Nat Commun (2019) 10 pp. 2301-2301 [ DOI: doi:10.1038/s41467-019-10247-4 Pubmed: 31127102 ]
- Dna (145-mer) (44 kDa, DNA from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Histone h2a type 1-b/e (14 kDa, Protein from Homo sapiens)
- Dna (145-mer) (44 kDa, DNA from Homo sapiens)
- Cenp-a nucleosome and antibody complex (Complex from Homo sapiens)
- Histone h3-like centromeric protein a (18 kDa, Protein from Homo sapiens)
- Scfv (29 kDa, Protein from Mus musculus)
- Histone h2b type 1-j (13 kDa, Protein from Homo sapiens)