Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 9cod
Q-score: 0.295
Lokareddy RK, Hou CD, Forti F, Iglesias SM, Li F, Pavlenok M, Horner DS, Niederweis M, Briani F, Cingolani G
Nat Commun (2024) 15 pp. 8482-8482 [ Pubmed: 39353939 DOI: doi:10.1038/s41467-024-52752-1 ]
Pseudomonas phage DEV neck and tail (portal, head-to-tail and tail tube proteins)
Lokareddy RK, Hou CD, Forti F, Iglesias SM, Li F, Pavlenok M, Horner DS, Niederweis M, Briani F, Cingolani G
Nat Commun (2024) 15 pp. 8482-8482 [ Pubmed: 39353939 DOI: doi:10.1038/s41467-024-52752-1 ]
- Gp75 tail tube (35 kDa, Protein from Pseudomonas phage vB PaeP DEV)
- Gp80 portal protein (81 kDa, Protein from Pseudomonas phage vB PaeP DEV)
- Gp83 head-to-tail (27 kDa, Protein from Pseudomonas phage vB PaeP DEV)
- Portal to tail complex of pseudomonas phage dev (Complex from Pseudomonas phage vB PaeP DEV)
Pseudomonas phage DEV 5-fold vertex (major coat protein)
Lokareddy RK, Hou CD, Forti F, Iglesias SM, Li F, Pavlenok M, Horner DS, Niederweis M, Briani F, Cingolani G
Nat Commun (2024) 15 pp. 8482-8482 [ Pubmed: 39353939 DOI: doi:10.1038/s41467-024-52752-1 ]
Pseudomonas phage DEV gp72 ejection protein (pre-ejection conformation)
Lokareddy RK, Hou CD, Forti F, Iglesias SM, Li F, Pavlenok M, Horner DS, Niederweis M, Briani F, Cingolani G
Nat Commun (2024) 15 pp. 8482-8482 [ Pubmed: 39353939 DOI: doi:10.1038/s41467-024-52752-1 ]
Cryo-EM structure of phage DEV ejection proteins gp72:gp73
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8vxq
Q-score: 0.345
Lokareddy RK, Hou CD, Forti F, Iglesias SM, Li F, Pavlenok M, Horner DS, Niederweis M, Briani F, Cingolani G
Nat Commun (2024) 15 pp. 8482-8482 [ Pubmed: 39353939 DOI: doi:10.1038/s41467-024-52752-1 ]
- N4 gp52-like protein (16 kDa, Protein from Pseudomonas phage vB PaeP DEV)
- Gp72 (57 kDa, Protein from Pseudomonas phage vB PaeP DEV)
- Pseudomonas phage vb_paep_dev (Virus from Pseudomonas phage vB PaeP DEV)
In situ cryo-EM structure of Pseudomonas phage E217 tail baseplate in C6 map
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 8env
Q-score: 0.413
Li F, Hou CD, Lokareddy RK, Yang R, Forti F, Briani F, Cingolani G
Nat Commun (2023) 14 pp. 4052-4052 [ Pubmed: 37422479 DOI: doi:10.1038/s41467-023-39756-z ]
- Sheath protein gp31 (53 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Structural protein gp45 (54 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Sheath initiator gp34 (11 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate_j domain-containing protein gp44 (43 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Structural protein gp33 (11 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Pseudomonas phage vb_paem_e217 (Virus from Pseudomonas phage vB PaeM E217)
- Ripcord gp36 (16 kDa, Protein from Pseudomonas phage vB PaeM E217)
Pseudomonas phage E217 baseplate complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8eon
Q-score: 0.439
Li F, Hou CD, Lokareddy RK, Yang R, Forti F, Briani F, Cingolani G
Nat Commun (2023) 14 pp. 4052-4052 [ Pubmed: 37422479 DOI: doi:10.1038/s41467-023-39756-z ]
- Baseplate hub gp41 (32 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate component gp33 (11 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate component gp34 (11 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate component gp37 (19 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate spike gp43 (23 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Triplex gp45 (54 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate component gp38 (21 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Triplex gp44-b (43 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Baseplate component gp36 (16 kDa, Protein from Pseudomonas phage vB PaeM E217)
- Pseudomonas phage vb_paem_e217 (Virus from Pseudomonas phage vB PaeM E217)
Pseudomonas phage E217 5-fold vertex (capsid and decorating proteins)
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 8frs
Q-score: 0.567
Li F, Hou CD, Lokareddy RK, Yang R, Forti F, Briani F, Cingolani G
Nat Commun (2023) 14 pp. 4052-4052 [ Pubmed: 37422479 DOI: doi:10.1038/s41467-023-39756-z ]
Pseudomonas phage E217 extended sheath and tail tube
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8fuv
Q-score: 0.55
Li F, Hou CD, Lokareddy RK, Yang R, Forti F, Briani F, Cingolani G
Nat Commun (2023) 14 pp. 4052-4052 [ Pubmed: 37422479 DOI: doi:10.1038/s41467-023-39756-z ]
Pseudomonas phage E217 contracted sheath
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8fvg
Q-score: 0.478
Li F, Hou CD, Lokareddy RK, Yang R, Forti F, Briani F, Cingolani G
Nat Commun (2023) 14 pp. 4052-4052 [ Pubmed: 37422479 DOI: doi:10.1038/s41467-023-39756-z ]